PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ISY
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Gene Pathway Family Confidence Status
Pcabscaffold_1026_1-3740570023130.1 Alkaloid ISY medium pass
Pcabscaffold_1026_1-3740570023140.1 Alkaloid ISY medium pass
Pcabscaffold_1110058050.1 Alkaloid ISY medium pass
Pcabscaffold_116160077770.1 Alkaloid ISY low borderline
Pcabscaffold_11810084140.1 Alkaloid ISY low borderline
Pcabscaffold_13040140180.1 Alkaloid ISY medium pass
Pcabscaffold_13630162670.1 Alkaloid ISY low borderline
Pcabscaffold_13900172180.1 Alkaloid ISY low borderline
Pcabscaffold_140174630.1 Alkaloid ISY medium pass
Pcabscaffold_15090224320.1 Alkaloid ISY medium pass
Pcabscaffold_1740299770.1 Alkaloid ISY medium pass
Pcabscaffold_1740299790.1 Alkaloid ISY medium pass
Pcabscaffold_1740299800.1 Alkaloid ISY low borderline
Pcabscaffold_190346290.1 Alkaloid ISY low borderline
Pcabscaffold_200390370.1 Alkaloid ISY low borderline
Pcabscaffold_20490404090.1 Alkaloid ISY medium pass
Pcabscaffold_228230457440.1 Alkaloid ISY medium pass
Pcabscaffold_28060555500.1 Alkaloid ISY low borderline
Pcabscaffold_3700673150.1 Alkaloid ISY low borderline
Pcabscaffold_37360676380.1 Alkaloid ISY low borderline
Pcabscaffold_37810679800.1 Alkaloid ISY low borderline
Pcabscaffold_4040718400.1 Alkaloid ISY medium pass
Pcabscaffold_42260735750.1 Alkaloid ISY low borderline
Pcabscaffold_4610764240.1 Alkaloid ISY medium pass
Pcabscaffold_4610764260.1 Alkaloid ISY medium pass
Pcabscaffold_500812380.1 Alkaloid ISY medium pass
Pcabscaffold_60880370.1 Alkaloid ISY medium pass
Pcabscaffold_6700928550.1 Alkaloid ISY medium pass
Pcabscaffold_81003230.1 Alkaloid ISY high pass
Pcabscaffold_821019180.1 Alkaloid ISY low borderline
Pcabscaffold_941083010.1 Alkaloid ISY medium pass
Pcabscaffold_941083020.1 Alkaloid ISY medium pass
Pcabscaffold_941083030.1 Alkaloid ISY medium pass
Pcabscaffold_9821100650.1 Alkaloid ISY medium pass