PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1653057-107288310001890.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_10350026830.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_10770044570.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_10770044580.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_10810046520.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_1110057340.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_11180060500.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_11270062820.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_11700081210.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_1250110950.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_1250110960.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_12860125870.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_14170185020.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_1550238110.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_16950286600.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_1980369220.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_1_1017389-68718490376330.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_213_1048694-11545650425720.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_220_1-13634480441630.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_24410492280.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_24410492310.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_2870562900.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_28_1-21021360568680.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_28_2104028-40092960570550.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_33270630730.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_3380636740.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_340641180.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_3540656050.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_381_1-3498320687440.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_389_1-9159850694370.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_469_1-815310768270.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_49_1-23684460798230.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_49_1-23684460798670.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_500809850.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_542_228868-7116370843790.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_5720864490.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_6550918920.1 Steroid ROT3/CYP90C1 low borderline
Pcabscaffold_74_258846-35974070972320.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_770982010.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_770982240.1 Steroid ROT3/CYP90C1 medium pass
Pcabscaffold_770982250.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_831023610.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_8321025640.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_8351026540.1 Steroid ROT3/CYP90C1 medium borderline
Pcabscaffold_871044520.1 Steroid ROT3/CYP90C1 medium borderline