PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: MVK
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Gene Pathway Family Confidence Status
Pcabscaffold_12410108160.1 Terpenoid MVK low borderline
Pcabscaffold_12680120250.1 Terpenoid MVK low borderline
Pcabscaffold_20381380.1 Terpenoid MVK medium pass
Pcabscaffold_2040403120.1 Terpenoid MVK low borderline
Pcabscaffold_21410427460.1 Terpenoid MVK low borderline
Pcabscaffold_21850435440.1 Terpenoid MVK low borderline
Pcabscaffold_24430492470.1 Terpenoid MVK low borderline
Pcabscaffold_24780496130.1 Terpenoid MVK low borderline
Pcabscaffold_2560508780.1 Terpenoid MVK low borderline
Pcabscaffold_27920554250.1 Terpenoid MVK low borderline
Pcabscaffold_30_551985-37613100599590.1 Terpenoid MVK low borderline
Pcabscaffold_3630666710.1 Terpenoid MVK low borderline
Pcabscaffold_403250717210.1 Terpenoid MVK low borderline
Pcabscaffold_450755640.1 Terpenoid MVK low borderline
Pcabscaffold_4540760240.1 Terpenoid MVK medium pass
Pcabscaffold_45520761220.1 Terpenoid MVK low borderline
Pcabscaffold_4830788620.1 Terpenoid MVK low borderline
Pcabscaffold_550848210.1 Terpenoid MVK low borderline
Pcabscaffold_610888440.1 Terpenoid MVK medium pass
Pcabscaffold_6460913480.1 Terpenoid MVK medium pass
Pcabscaffold_861037130.1 Terpenoid MVK low borderline
Pcabscaffold_9451085080.1 Terpenoid MVK low borderline