PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP80B1
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Gene Pathway Family Confidence Status
Pcabscaffold_10100017110.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_10100017130.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_10710042860.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_11390068640.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_12300103640.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_130135920.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_147_1-13211470209730.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_15290231850.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_1560242900.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_167290281430.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_169_1-5014340287980.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_17240296210.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_1860336900.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_19040350040.1 Alkaloid CYP80B1 low borderline
Pcabscaffold_1930357260.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_19540364020.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_20560405580.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_21200422830.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_2530503700.1 Alkaloid CYP80B1 medium pass
Pcabscaffold_2870563200.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_3190611530.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_3240618950.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_3570657990.1 Alkaloid CYP80B1 medium pass
Pcabscaffold_360661710.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_39_3309495-57433670706240.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_402_19828-10181310717030.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_4410749840.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_4740778950.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_4740778970.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_5550851340.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_576_58064-6507780866740.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_6300906120.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_630904020.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_680932870.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_6820933840.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_731_226832-7584620964230.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_811013830.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_831023340.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_8511032860.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_861038130.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_861040150.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_8671042640.1 Alkaloid CYP80B1 medium borderline
Pcabscaffold_9561089070.1 Alkaloid CYP80B1 medium borderline