PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCoAOMT
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Gene Pathway Family Confidence Status
Pcabscaffold_1260117720.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_12620119050.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_13000138980.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_13050140320.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_13050140350.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_1350154360.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_15290231800.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_1600259490.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_18140324850.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_19120352480.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_20386300.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_20680409480.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_20820412320.1 Phenylpropanoid CCoAOMT low borderline
Pcabscaffold_2140426410.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_230465020.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_27940554530.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_285250561600.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_3240618880.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_3240618900.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_3550656530.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_3550656570.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_4070721440.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_47430779570.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_4990797400.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_4990797430.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_4_900905-60197250804130.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_5850871860.1 Phenylpropanoid CCoAOMT low borderline
Pcabscaffold_590874520.1 Phenylpropanoid CCoAOMT low borderline
Pcabscaffold_5970877610.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_6170895430.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_6540918630.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_7_898318-55986911001770.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_9141067460.1 Phenylpropanoid CCoAOMT medium pass
Pcabscaffold_9221074070.1 Phenylpropanoid CCoAOMT medium pass