PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Pcabscaffold_101880019740.1 Alkaloid BBE medium borderline
Pcabscaffold_101880019750.1 Alkaloid BBE medium borderline
Pcabscaffold_10300025250.1 Alkaloid BBE medium borderline
Pcabscaffold_10360027200.1 Alkaloid BBE low borderline
Pcabscaffold_10450029140.1 Alkaloid BBE medium borderline
Pcabscaffold_1070041590.1 Alkaloid BBE medium borderline
Pcabscaffold_1070041600.1 Alkaloid BBE medium borderline
Pcabscaffold_10950049840.1 Alkaloid BBE medium borderline
Pcabscaffold_10950050010.1 Alkaloid BBE medium borderline
Pcabscaffold_110_71771-19721700055070.1 Alkaloid BBE medium borderline
Pcabscaffold_112_419008-19102860063880.1 Alkaloid BBE medium borderline
Pcabscaffold_1170080940.1 Alkaloid BBE medium borderline
Pcabscaffold_12380105650.1 Alkaloid BBE medium borderline
Pcabscaffold_12380105660.1 Alkaloid BBE medium borderline
Pcabscaffold_12380105680.1 Alkaloid BBE medium borderline
Pcabscaffold_12380105690.1 Alkaloid BBE medium borderline
Pcabscaffold_12380105700.1 Alkaloid BBE medium borderline
Pcabscaffold_12380105710.1 Alkaloid BBE medium borderline
Pcabscaffold_12380105730.1 Alkaloid BBE medium borderline
Pcabscaffold_12410108410.1 Alkaloid BBE medium borderline
Pcabscaffold_12670119970.1 Alkaloid BBE medium borderline
Pcabscaffold_12670120010.1 Alkaloid BBE medium borderline
Pcabscaffold_131_1149939-19609900145610.1 Alkaloid BBE medium borderline
Pcabscaffold_13500156870.1 Alkaloid BBE medium borderline
Pcabscaffold_1370164610.1 Alkaloid BBE medium borderline
Pcabscaffold_1370164620.1 Alkaloid BBE medium borderline
Pcabscaffold_1370164670.1 Alkaloid BBE medium borderline
Pcabscaffold_1370164680.1 Alkaloid BBE medium borderline
Pcabscaffold_1370164720.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173700.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173710.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173730.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173740.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173750.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173770.1 Alkaloid BBE low borderline
Pcabscaffold_13960173780.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173800.1 Alkaloid BBE medium borderline
Pcabscaffold_13960173810.1 Alkaloid BBE medium borderline
Pcabscaffold_14520201420.1 Alkaloid BBE medium borderline
Pcabscaffold_1570245020.1 Alkaloid BBE medium borderline
Pcabscaffold_1570245030.1 Alkaloid BBE medium borderline
Pcabscaffold_1570245040.1 Alkaloid BBE medium borderline
Pcabscaffold_1570245070.1 Alkaloid BBE medium borderline
Pcabscaffold_1570245080.1 Alkaloid BBE medium borderline
Pcabscaffold_158110251910.1 Alkaloid BBE medium borderline
Pcabscaffold_15860252870.1 Alkaloid BBE low borderline
Pcabscaffold_163270270150.1 Alkaloid BBE medium borderline
Pcabscaffold_163270270160.1 Alkaloid BBE medium borderline
Pcabscaffold_16460273470.1 Alkaloid BBE medium borderline
Pcabscaffold_16460273480.1 Alkaloid BBE medium borderline