PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
Reset
Gene Pathway Family Confidence Status
Pcabscaffold_0_1653057-107288310001600.1 Phenylpropanoid CSE medium pass
Pcabscaffold_10430028830.1 Phenylpropanoid CSE medium pass
Pcabscaffold_10450029350.1 Phenylpropanoid CSE medium pass
Pcabscaffold_10810046420.1 Phenylpropanoid CSE medium pass
Pcabscaffold_10810046440.1 Phenylpropanoid CSE medium pass
Pcabscaffold_10810046460.1 Phenylpropanoid CSE medium pass
Pcabscaffold_10810046470.1 Phenylpropanoid CSE medium pass
Pcabscaffold_10820046690.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1130065780.1 Phenylpropanoid CSE medium pass
Pcabscaffold_11380068250.1 Phenylpropanoid CSE low borderline
Pcabscaffold_1170080890.1 Phenylpropanoid CSE medium pass
Pcabscaffold_12200099790.1 Phenylpropanoid CSE low borderline
Pcabscaffold_12380105480.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1260117630.1 Phenylpropanoid CSE medium pass
Pcabscaffold_12_923860-48109350132220.1 Phenylpropanoid CSE medium pass
Pcabscaffold_13240146760.1 Phenylpropanoid CSE medium pass
Pcabscaffold_13420152790.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1361_1-1198270162230.1 Phenylpropanoid CSE medium pass
Pcabscaffold_14150183980.1 Phenylpropanoid CSE medium pass
Pcabscaffold_14150183990.1 Phenylpropanoid CSE medium pass
Pcabscaffold_14150184020.1 Phenylpropanoid CSE medium pass
Pcabscaffold_14300190920.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1530233590.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1550239410.1 Phenylpropanoid CSE medium pass
Pcabscaffold_157750246470.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1580247270.1 Phenylpropanoid CSE medium pass
Pcabscaffold_159_1688183-17053890256890.1 Phenylpropanoid CSE medium pass
Pcabscaffold_161_179220-17084620265360.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1670280590.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1710291800.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1710291910.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1710291930.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1740300080.1 Phenylpropanoid CSE low borderline
Pcabscaffold_17420301180.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1770307820.1 Phenylpropanoid CSE medium pass
Pcabscaffold_17830311780.1 Phenylpropanoid CSE medium pass
Pcabscaffold_17950314420.1 Phenylpropanoid CSE medium pass
Pcabscaffold_17950314430.1 Phenylpropanoid CSE medium pass
Pcabscaffold_1820326410.1 Phenylpropanoid CSE medium pass
Pcabscaffold_183_1-15130170330130.1 Phenylpropanoid CSE medium pass
Pcabscaffold_183_1-15130170331310.1 Phenylpropanoid CSE medium pass
Pcabscaffold_183_1-15130170331320.1 Phenylpropanoid CSE medium pass
Pcabscaffold_183_1-15130170331330.1 Phenylpropanoid CSE medium pass
Pcabscaffold_19460361680.1 Phenylpropanoid CSE low borderline
Pcabscaffold_19480362040.1 Phenylpropanoid CSE medium pass
Pcabscaffold_19850370390.1 Phenylpropanoid CSE low borderline
Pcabscaffold_20180397310.1 Phenylpropanoid CSE medium pass
Pcabscaffold_20386200.1 Phenylpropanoid CSE medium pass
Pcabscaffold_20387890.1 Phenylpropanoid CSE medium pass
Pcabscaffold_20387900.1 Phenylpropanoid CSE medium pass