PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status
Pcabscaffold_10170019020.1 Flavonoid CHS medium pass
Pcabscaffold_10310025710.1 Flavonoid CHS medium pass
Pcabscaffold_10310025720.1 Flavonoid CHS medium pass
Pcabscaffold_10310025730.1 Flavonoid CHS medium pass
Pcabscaffold_10310025750.1 Flavonoid CHS medium pass
Pcabscaffold_107260043520.1 Flavonoid CHS medium pass
Pcabscaffold_12000094750.1 Flavonoid CHS medium pass
Pcabscaffold_12000094760.1 Flavonoid CHS medium pass
Pcabscaffold_1530233200.1 Flavonoid CHS medium pass
Pcabscaffold_1550239770.1 Flavonoid CHS medium pass
Pcabscaffold_1580248260.1 Flavonoid CHS medium pass
Pcabscaffold_1580248280.1 Flavonoid CHS medium pass
Pcabscaffold_1580248660.1 Flavonoid CHS medium pass
Pcabscaffold_1580248680.1 Flavonoid CHS medium pass
Pcabscaffold_1580248690.1 Flavonoid CHS medium pass
Pcabscaffold_1580248700.1 Flavonoid CHS medium pass
Pcabscaffold_16040261090.1 Flavonoid CHS medium pass
Pcabscaffold_1620266130.1 Flavonoid CHS low borderline
Pcabscaffold_1670279100.1 Flavonoid CHS medium pass
Pcabscaffold_1670279540.1 Flavonoid CHS medium pass
Pcabscaffold_1670279550.1 Flavonoid CHS medium pass
Pcabscaffold_1670279560.1 Flavonoid CHS medium pass
Pcabscaffold_20388330.1 Flavonoid CHS medium pass
Pcabscaffold_2100418000.1 Flavonoid CHS medium pass
Pcabscaffold_2820556560.1 Flavonoid CHS medium pass
Pcabscaffold_2840560130.1 Flavonoid CHS medium pass
Pcabscaffold_28470561110.1 Flavonoid CHS medium pass
Pcabscaffold_33910638740.1 Flavonoid CHS medium pass
Pcabscaffold_33910638750.1 Flavonoid CHS medium pass
Pcabscaffold_33910638760.1 Flavonoid CHS medium pass
Pcabscaffold_33910638780.1 Flavonoid CHS medium pass
Pcabscaffold_33910638800.1 Flavonoid CHS medium pass
Pcabscaffold_37_284008-34862800681030.1 Flavonoid CHS medium pass
Pcabscaffold_37_284008-34862800681040.1 Flavonoid CHS medium pass
Pcabscaffold_3840690390.1 Flavonoid CHS medium pass
Pcabscaffold_3970700500.1 Flavonoid CHS medium pass
Pcabscaffold_41490729700.1 Flavonoid CHS low borderline
Pcabscaffold_4490755250.1 Flavonoid CHS medium pass
Pcabscaffold_4790782240.1 Flavonoid CHS medium pass
Pcabscaffold_5050814490.1 Flavonoid CHS medium pass
Pcabscaffold_5050814500.1 Flavonoid CHS medium pass
Pcabscaffold_5050814510.1 Flavonoid CHS medium pass
Pcabscaffold_5050814520.1 Flavonoid CHS medium pass
Pcabscaffold_5050814530.1 Flavonoid CHS medium pass
Pcabscaffold_5050814540.1 Flavonoid CHS medium pass
Pcabscaffold_5050814550.1 Flavonoid CHS low borderline
Pcabscaffold_5050814560.1 Flavonoid CHS medium pass
Pcabscaffold_5110821180.1 Flavonoid CHS medium pass
Pcabscaffold_530831300.1 Flavonoid CHS medium pass
Pcabscaffold_5340836280.1 Flavonoid CHS medium pass