PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status
Pcabscaffold_11150059400.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_118_1-11863150086260.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_130136250.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_1360161890.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_1370164700.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_14670204560.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_15130227500.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_18020322220.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_18780340730.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_211_847-14465410421730.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_2560507440.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_25_430986-37583860515870.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_26760532030.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_27270544210.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_28700563720.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_360661350.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_3_2646351-60804880710300.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_3_2646351-60804880710930.1 Flavonoid ANS/LDOX medium pass
Pcabscaffold_3_2646351-60804880714130.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_40_644123-29686580725420.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_410725880.1 Flavonoid ANS/LDOX medium pass
Pcabscaffold_4170731170.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_42380736300.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_42900739320.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_4800787050.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_51250821710.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_5340837180.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_5430844220.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_6270901430.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_710949490.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_7630978120.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_7760987200.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_7900995690.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_790994260.1 Flavonoid ANS/LDOX medium pass
Pcabscaffold_81003510.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_861039170.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_861039190.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_861039260.1 Flavonoid ANS/LDOX medium borderline