PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
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Gene Pathway Family Confidence Status Best Target
Pcabscaffold_1000011010.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_1000011020.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_10360027330.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_10360027340.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_10820046760.1 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Pcabscaffold_11010052600.1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Pcabscaffold_12380105450.1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Pcabscaffold_12650119690.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pcabscaffold_13030139870.1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Pcabscaffold_15110227150.1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Pcabscaffold_17260296540.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_17260296550.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_2000392790.1 Rosmarinic Acid CPR medium pass CPR__00002__sp_A0A7T9QPQ1_CPR_PIPNI
Pcabscaffold_3_1-26455000708410.1 Rosmarinic Acid CPR medium pass CPR__00002__sp_A0A7T9QPQ1_CPR_PIPNI
Pcabscaffold_40_1-6370950723690.1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Pcabscaffold_4700776750.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pcabscaffold_5210826150.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pcabscaffold_570860970.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_570860980.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pcabscaffold_620896800.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pcabscaffold_690937310.1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Pcabscaffold_7600977480.1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Pcabscaffold_7950997840.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pcabscaffold_811012800.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pcabscaffold_821017990.1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Pcabscaffold_8631041340.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI