PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DXS
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Gene Pathway Family Confidence Status
Pcabscaffold_1030024920.1 Terpenoid DXS medium pass
Pcabscaffold_10780044950.1 Terpenoid DXS low borderline
Pcabscaffold_13950173660.1 Terpenoid DXS medium pass
Pcabscaffold_158690252910.1 Terpenoid DXS medium pass
Pcabscaffold_17580303350.1 Terpenoid DXS medium pass
Pcabscaffold_17580303360.1 Terpenoid DXS medium pass
Pcabscaffold_180318180.1 Terpenoid DXS medium pass
Pcabscaffold_180318560.1 Terpenoid DXS medium pass
Pcabscaffold_190347350.1 Terpenoid DXS medium pass
Pcabscaffold_2000393010.1 Terpenoid DXS medium pass
Pcabscaffold_20383720.1 Terpenoid DXS low borderline
Pcabscaffold_214300427730.1 Terpenoid DXS medium pass
Pcabscaffold_2670531110.1 Terpenoid DXS medium pass
Pcabscaffold_2750549230.1 Terpenoid DXS medium pass
Pcabscaffold_2750549240.1 Terpenoid DXS medium pass
Pcabscaffold_28990566160.1 Terpenoid DXS low borderline
Pcabscaffold_29940582810.1 Terpenoid DXS medium pass
Pcabscaffold_32240617940.1 Terpenoid DXS low borderline
Pcabscaffold_32630621680.1 Terpenoid DXS medium pass
Pcabscaffold_3850691450.1 Terpenoid DXS medium pass
Pcabscaffold_39220696530.1 Terpenoid DXS medium pass
Pcabscaffold_393470697290.1 Terpenoid DXS medium pass
Pcabscaffold_3990701980.1 Terpenoid DXS medium pass
Pcabscaffold_3_1-26455000708610.1 Terpenoid DXS medium pass
Pcabscaffold_4570762090.1 Terpenoid DXS medium pass
Pcabscaffold_510818840.1 Terpenoid DXS medium pass
Pcabscaffold_52050825910.1 Terpenoid DXS medium pass
Pcabscaffold_57760866860.1 Terpenoid DXS low borderline
Pcabscaffold_580868770.1 Terpenoid DXS medium pass
Pcabscaffold_60878740.1 Terpenoid DXS medium pass
Pcabscaffold_6320906690.1 Terpenoid DXS medium pass
Pcabscaffold_6460914210.1 Terpenoid DXS low borderline
Pcabscaffold_70060944660.1 Terpenoid DXS medium pass
Pcabscaffold_7020944990.1 Terpenoid DXS medium pass
Pcabscaffold_7120952540.1 Terpenoid DXS medium pass
Pcabscaffold_79950998660.1 Terpenoid DXS medium pass
Pcabscaffold_81005120.1 Terpenoid DXS medium pass
Pcabscaffold_811011930.1 Terpenoid DXS medium pass
Pcabscaffold_8481032080.1 Terpenoid DXS medium pass
Pcabscaffold_8481032090.1 Terpenoid DXS medium pass
Pcabscaffold_8571035310.1 Terpenoid DXS medium pass
Pcabscaffold_91631068450.1 Terpenoid DXS medium pass