PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
Pcabscaffold_10150018500.1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcabscaffold_104_1-3224010030750.1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_105_81081-20652500036250.1 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_106_1388106-21756310040840.1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_1070041380.1 Flavonoid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Pcabscaffold_10850047490.1 Flavonoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
Pcabscaffold_11140059150.1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_11240061980.1 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
Pcabscaffold_113770068030.1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_11450070210.1 Flavonoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
Pcabscaffold_1150073790.1 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pcabscaffold_11610077440.1 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_1170079720.1 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Pcabscaffold_12170098910.1 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pcabscaffold_12240100990.1 Flavonoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
Pcabscaffold_122_1075706-18185570102970.1 Flavonoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_123_1-16801630106160.1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_12740122390.1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_12740122400.1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_130133240.1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcabscaffold_13180143480.1 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_13290147700.1 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
Pcabscaffold_13540157640.1 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pcabscaffold_1360158840.1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcabscaffold_1370165010.1 Flavonoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
Pcabscaffold_1430189380.1 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Pcabscaffold_1440195580.1 Flavonoid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pcabscaffold_14500201140.1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcabscaffold_1480211160.1 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_15010222690.1 Flavonoid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
Pcabscaffold_150217420.1 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pcabscaffold_15160228420.1 Flavonoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Pcabscaffold_1550238580.1 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_15820252190.1 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Pcabscaffold_160257030.1 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_160257180.1 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_162040267320.1 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_1670280350.1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_16750281910.1 Flavonoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_1770308750.1 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
Pcabscaffold_180317920.1 Flavonoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_180318310.1 Flavonoid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pcabscaffold_180318920.1 Flavonoid 4CL low borderline 4CL__00008__sp_Q42982_4CL2_ORYSJ
Pcabscaffold_180318980.1 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_180320720.1 Flavonoid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pcabscaffold_190345260.1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_190345910.1 Flavonoid 4CL medium pass 4CL__00008__sp_Q42982_4CL2_ORYSJ
Pcabscaffold_190346170.1 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_190346280.1 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_190346370.1 Flavonoid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU