PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GGPPS
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1653057-107288310005850.1 Terpenoid GGPPS medium borderline
Pcabscaffold_100006480.1 Terpenoid GGPPS medium borderline
Pcabscaffold_1070041020.1 Terpenoid GGPPS medium borderline
Pcabscaffold_10820046860.1 Terpenoid GGPPS medium borderline
Pcabscaffold_110052030.1 Terpenoid GGPPS medium borderline
Pcabscaffold_11780083580.1 Terpenoid GGPPS medium borderline
Pcabscaffold_12510113410.1 Terpenoid GGPPS medium borderline
Pcabscaffold_130136590.1 Terpenoid GGPPS medium borderline
Pcabscaffold_13970173910.1 Terpenoid GGPPS medium borderline
Pcabscaffold_1600258290.1 Terpenoid GGPPS low borderline
Pcabscaffold_16790282370.1 Terpenoid GGPPS medium borderline
Pcabscaffold_180317640.1 Terpenoid GGPPS medium borderline
Pcabscaffold_180318490.1 Terpenoid GGPPS medium borderline
Pcabscaffold_180320230.1 Terpenoid GGPPS medium borderline
Pcabscaffold_24950498920.1 Terpenoid GGPPS medium borderline
Pcabscaffold_27090541700.1 Terpenoid GGPPS medium borderline
Pcabscaffold_2750549030.1 Terpenoid GGPPS medium borderline
Pcabscaffold_29050572620.1 Terpenoid GGPPS medium borderline
Pcabscaffold_29520577650.1 Terpenoid GGPPS medium pass
Pcabscaffold_29520577660.1 Terpenoid GGPPS medium borderline
Pcabscaffold_33080628260.1 Terpenoid GGPPS medium borderline
Pcabscaffold_36550668460.1 Terpenoid GGPPS medium pass
Pcabscaffold_380684440.1 Terpenoid GGPPS low borderline
Pcabscaffold_380684620.1 Terpenoid GGPPS medium borderline
Pcabscaffold_3_1-26455000710040.1 Terpenoid GGPPS medium borderline
Pcabscaffold_4430752040.1 Terpenoid GGPPS medium borderline
Pcabscaffold_4600763340.1 Terpenoid GGPPS medium borderline
Pcabscaffold_49460796380.1 Terpenoid GGPPS medium borderline
Pcabscaffold_5430844460.1 Terpenoid GGPPS medium borderline
Pcabscaffold_5900875310.1 Terpenoid GGPPS medium borderline
Pcabscaffold_5990878430.1 Terpenoid GGPPS medium borderline
Pcabscaffold_620896710.1 Terpenoid GGPPS medium borderline
Pcabscaffold_620898680.1 Terpenoid GGPPS medium borderline
Pcabscaffold_6390908050.1 Terpenoid GGPPS medium borderline
Pcabscaffold_7890992860.1 Terpenoid GGPPS medium borderline
Pcabscaffold_7950997940.1 Terpenoid GGPPS medium borderline
Pcabscaffold_8441030830.1 Terpenoid GGPPS medium borderline
Pcabscaffold_871044960.1 Terpenoid GGPPS medium borderline
Pcabscaffold_891055450.1 Terpenoid GGPPS medium borderline
Pcabscaffold_901061180.1 Terpenoid GGPPS medium borderline