PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SQE
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Gene Pathway Family Confidence Status
Pcabscaffold_11770082870.1 Steroid SQE medium pass
Pcabscaffold_11770082880.1 Steroid SQE medium pass
Pcabscaffold_12270101920.1 Steroid SQE medium pass
Pcabscaffold_1260116580.1 Steroid SQE medium pass
Pcabscaffold_1260116590.1 Steroid SQE medium pass
Pcabscaffold_1260117220.1 Steroid SQE low borderline
Pcabscaffold_12980130270.1 Steroid SQE medium pass
Pcabscaffold_1350154910.1 Steroid SQE medium pass
Pcabscaffold_13600162130.1 Steroid SQE low borderline
Pcabscaffold_1600258220.1 Steroid SQE medium pass
Pcabscaffold_1600260070.1 Steroid SQE medium pass
Pcabscaffold_1700289230.1 Steroid SQE medium pass
Pcabscaffold_20385110.1 Steroid SQE medium pass
Pcabscaffold_20385120.1 Steroid SQE medium pass
Pcabscaffold_240482720.1 Steroid SQE low borderline
Pcabscaffold_26580529020.1 Steroid SQE medium pass
Pcabscaffold_2850561320.1 Steroid SQE medium pass
Pcabscaffold_4050719190.1 Steroid SQE medium pass
Pcabscaffold_4410750040.1 Steroid SQE medium pass
Pcabscaffold_470775370.1 Steroid SQE low borderline
Pcabscaffold_4840788790.1 Steroid SQE medium pass
Pcabscaffold_541_1-6305930842970.1 Steroid SQE low borderline
Pcabscaffold_60510885470.1 Steroid SQE low borderline
Pcabscaffold_6370907740.1 Steroid SQE low borderline
Pcabscaffold_6600924050.1 Steroid SQE medium pass
Pcabscaffold_8251021040.1 Steroid SQE medium pass
Pcabscaffold_8501032300.1 Steroid SQE medium pass