PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: MPO
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Gene Pathway Family Confidence Status
Pcabscaffold_105_81081-20652500037080.1 Alkaloid MPO high pass
Pcabscaffold_10930049270.1 Alkaloid MPO low borderline
Pcabscaffold_10930049280.1 Alkaloid MPO low borderline
Pcabscaffold_10930049300.1 Alkaloid MPO medium pass
Pcabscaffold_12300103670.1 Alkaloid MPO medium pass
Pcabscaffold_1480210720.1 Alkaloid MPO high pass
Pcabscaffold_150218220.1 Alkaloid MPO low borderline
Pcabscaffold_15890253580.1 Alkaloid MPO medium pass
Pcabscaffold_15890253590.1 Alkaloid MPO medium pass
Pcabscaffold_1899_1-1944880344830.1 Alkaloid MPO low borderline
Pcabscaffold_2150428430.1 Alkaloid MPO medium pass
Pcabscaffold_22080441070.1 Alkaloid MPO low borderline
Pcabscaffold_22910459370.1 Alkaloid MPO high pass
Pcabscaffold_2530503670.1 Alkaloid MPO medium pass
Pcabscaffold_2530503680.1 Alkaloid MPO medium pass
Pcabscaffold_25_430986-37583860514680.1 Alkaloid MPO medium pass
Pcabscaffold_27810552610.1 Alkaloid MPO medium pass
Pcabscaffold_27810552620.1 Alkaloid MPO medium pass
Pcabscaffold_3190611280.1 Alkaloid MPO medium pass
Pcabscaffold_3220617340.1 Alkaloid MPO low borderline
Pcabscaffold_3280623420.1 Alkaloid MPO medium pass
Pcabscaffold_38530691650.1 Alkaloid MPO low borderline
Pcabscaffold_3920695970.1 Alkaloid MPO medium pass
Pcabscaffold_3920695980.1 Alkaloid MPO medium pass
Pcabscaffold_3920695990.1 Alkaloid MPO medium pass
Pcabscaffold_3920696000.1 Alkaloid MPO medium pass
Pcabscaffold_3920696010.1 Alkaloid MPO low borderline
Pcabscaffold_3920696140.1 Alkaloid MPO medium pass
Pcabscaffold_39_3309495-57433670706260.1 Alkaloid MPO medium pass
Pcabscaffold_39_3309495-57433670706330.1 Alkaloid MPO medium pass
Pcabscaffold_4780781600.1 Alkaloid MPO medium pass
Pcabscaffold_4_900905-60197250802180.1 Alkaloid MPO low borderline
Pcabscaffold_510819750.1 Alkaloid MPO medium pass
Pcabscaffold_510819890.1 Alkaloid MPO medium pass
Pcabscaffold_510819900.1 Alkaloid MPO medium pass
Pcabscaffold_510819910.1 Alkaloid MPO low borderline
Pcabscaffold_6110892910.1 Alkaloid MPO medium pass
Pcabscaffold_630903730.1 Alkaloid MPO medium pass
Pcabscaffold_6830934480.1 Alkaloid MPO low borderline
Pcabscaffold_770984660.1 Alkaloid MPO medium pass
Pcabscaffold_8481031960.1 Alkaloid MPO low borderline
Pcabscaffold_9841100820.1 Alkaloid MPO medium pass