PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
Reset
Gene Pathway Family Confidence Status
Pcabscaffold_10380027630.1 Alkaloid NCS medium borderline
Pcabscaffold_10380027640.1 Alkaloid NCS medium borderline
Pcabscaffold_11010052570.1 Alkaloid NCS medium borderline
Pcabscaffold_114_1103768-21090250072560.1 Alkaloid NCS low borderline
Pcabscaffold_114_1103768-21090250072590.1 Alkaloid NCS low borderline
Pcabscaffold_114_1103768-21090250072620.1 Alkaloid NCS low borderline
Pcabscaffold_11500074430.1 Alkaloid NCS medium pass
Pcabscaffold_130134750.1 Alkaloid NCS low borderline
Pcabscaffold_14530201510.1 Alkaloid NCS medium borderline
Pcabscaffold_146_912545-18156200206350.1 Alkaloid NCS low borderline
Pcabscaffold_15130227500.1 Alkaloid NCS medium borderline
Pcabscaffold_15300233880.1 Alkaloid NCS low borderline
Pcabscaffold_15300233890.1 Alkaloid NCS low borderline
Pcabscaffold_15300233920.1 Alkaloid NCS low borderline
Pcabscaffold_15300233940.1 Alkaloid NCS low borderline
Pcabscaffold_15390235660.1 Alkaloid NCS medium borderline
Pcabscaffold_16810284160.1 Alkaloid NCS medium borderline
Pcabscaffold_1720295090.1 Alkaloid NCS medium borderline
Pcabscaffold_18200328090.1 Alkaloid NCS medium borderline
Pcabscaffold_18780340540.1 Alkaloid NCS medium borderline
Pcabscaffold_1930356910.1 Alkaloid NCS low borderline
Pcabscaffold_200389770.1 Alkaloid NCS low borderline
Pcabscaffold_2170433150.1 Alkaloid NCS medium pass
Pcabscaffold_220439240.1 Alkaloid NCS medium borderline
Pcabscaffold_230463710.1 Alkaloid NCS low borderline
Pcabscaffold_24330490560.1 Alkaloid NCS medium pass
Pcabscaffold_24530493310.1 Alkaloid NCS medium borderline
Pcabscaffold_24540493420.1 Alkaloid NCS medium borderline
Pcabscaffold_27270544210.1 Alkaloid NCS medium borderline
Pcabscaffold_27270544220.1 Alkaloid NCS medium borderline
Pcabscaffold_3280623620.1 Alkaloid NCS medium borderline
Pcabscaffold_33570634760.1 Alkaloid NCS low borderline
Pcabscaffold_360663660.1 Alkaloid NCS medium pass
Pcabscaffold_39760701430.1 Alkaloid NCS low borderline
Pcabscaffold_39760701460.1 Alkaloid NCS low borderline
Pcabscaffold_39760701470.1 Alkaloid NCS medium pass
Pcabscaffold_3_2646351-60804880713460.1 Alkaloid NCS medium borderline
Pcabscaffold_3_2646351-60804880714130.1 Alkaloid NCS medium borderline
Pcabscaffold_410725860.1 Alkaloid NCS medium borderline
Pcabscaffold_4300743360.1 Alkaloid NCS low borderline
Pcabscaffold_450756700.1 Alkaloid NCS medium borderline
Pcabscaffold_470772550.1 Alkaloid NCS medium borderline
Pcabscaffold_470772560.1 Alkaloid NCS medium borderline
Pcabscaffold_4_1-9001310799350.1 Alkaloid NCS medium borderline
Pcabscaffold_4_900905-60197250801520.1 Alkaloid NCS medium borderline
Pcabscaffold_5070816410.1 Alkaloid NCS low borderline
Pcabscaffold_530831130.1 Alkaloid NCS medium borderline
Pcabscaffold_5660856040.1 Alkaloid NCS low borderline
Pcabscaffold_5790868160.1 Alkaloid NCS medium borderline
Pcabscaffold_6420912120.1 Alkaloid NCS low borderline