PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status
Pcabscaffold_10540032680.1 Phenylpropanoid CCR low borderline
Pcabscaffold_10850047360.1 Phenylpropanoid CCR medium pass
Pcabscaffold_10850047370.1 Phenylpropanoid CCR low borderline
Pcabscaffold_11430069670.1 Phenylpropanoid CCR low borderline
Pcabscaffold_13340149630.1 Phenylpropanoid CCR low borderline
Pcabscaffold_140176290.1 Phenylpropanoid CCR low borderline
Pcabscaffold_1430189950.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_150217560.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_15200229900.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_15200229910.1 Phenylpropanoid CCR medium pass
Pcabscaffold_16020260710.1 Phenylpropanoid CCR low borderline
Pcabscaffold_1860336810.1 Phenylpropanoid CCR low borderline
Pcabscaffold_19540363940.1 Phenylpropanoid CCR low borderline
Pcabscaffold_2040402740.1 Phenylpropanoid CCR low borderline
Pcabscaffold_2160430160.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_2190436680.1 Phenylpropanoid CCR medium pass
Pcabscaffold_220_1-13634480441960.1 Phenylpropanoid CCR medium pass
Pcabscaffold_2370476940.1 Phenylpropanoid CCR low borderline
Pcabscaffold_2560508390.1 Phenylpropanoid CCR low borderline
Pcabscaffold_2680534740.1 Phenylpropanoid CCR medium pass
Pcabscaffold_29_1-33670660584010.1 Phenylpropanoid CCR medium pass
Pcabscaffold_3380637630.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_3380637640.1 Phenylpropanoid CCR low borderline
Pcabscaffold_402_19828-10181310716950.1 Phenylpropanoid CCR low borderline
Pcabscaffold_429_1-8336930739470.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_4590762760.1 Phenylpropanoid CCR low borderline
Pcabscaffold_530831900.1 Phenylpropanoid CCR medium pass
Pcabscaffold_530831910.1 Phenylpropanoid CCR medium pass
Pcabscaffold_5490847030.1 Phenylpropanoid CCR medium pass
Pcabscaffold_55120849770.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_58980874250.1 Phenylpropanoid CCR medium pass
Pcabscaffold_58980874260.1 Phenylpropanoid CCR low borderline
Pcabscaffold_640910810.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_640910820.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_6840935180.1 Phenylpropanoid CCR low borderline
Pcabscaffold_690939430.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_7750986870.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_7750986880.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_8411030300.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_876_1-3417211048110.1 Phenylpropanoid CCR medium pass
Pcabscaffold_9341080460.1 Phenylpropanoid CCR medium borderline
Pcabscaffold_9_15686-49974061108180.1 Phenylpropanoid CCR low borderline