PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1-16463080000770.1 Alkaloid 8HGO medium borderline
Pcabscaffold_110052380.1 Alkaloid 8HGO medium borderline
Pcabscaffold_114_1103768-21090250073400.1 Alkaloid 8HGO medium pass
Pcabscaffold_12170099050.1 Alkaloid 8HGO low borderline
Pcabscaffold_12820124770.1 Alkaloid 8HGO medium borderline
Pcabscaffold_13480153870.1 Alkaloid 8HGO low borderline
Pcabscaffold_14110183070.1 Alkaloid 8HGO medium borderline
Pcabscaffold_14110183080.1 Alkaloid 8HGO medium borderline
Pcabscaffold_14730207330.1 Alkaloid 8HGO medium pass
Pcabscaffold_150217240.1 Alkaloid 8HGO medium pass
Pcabscaffold_15920253990.1 Alkaloid 8HGO medium borderline
Pcabscaffold_1680283380.1 Alkaloid 8HGO medium pass
Pcabscaffold_1680283390.1 Alkaloid 8HGO low borderline
Pcabscaffold_17620304710.1 Alkaloid 8HGO medium borderline
Pcabscaffold_1820325820.1 Alkaloid 8HGO medium borderline
Pcabscaffold_183_1-15130170331720.1 Alkaloid 8HGO low borderline
Pcabscaffold_1910351220.1 Alkaloid 8HGO medium pass
Pcabscaffold_1910351230.1 Alkaloid 8HGO medium pass
Pcabscaffold_1910351240.1 Alkaloid 8HGO medium borderline
Pcabscaffold_2250451350.1 Alkaloid 8HGO medium borderline
Pcabscaffold_230462780.1 Alkaloid 8HGO medium borderline
Pcabscaffold_240482480.1 Alkaloid 8HGO medium borderline
Pcabscaffold_2600518700.1 Alkaloid 8HGO medium borderline
Pcabscaffold_2600518710.1 Alkaloid 8HGO medium borderline
Pcabscaffold_266_994123-20696070530690.1 Alkaloid 8HGO low borderline
Pcabscaffold_28_1-21021360567700.1 Alkaloid 8HGO medium borderline
Pcabscaffold_3590659150.1 Alkaloid 8HGO medium borderline
Pcabscaffold_3590659160.1 Alkaloid 8HGO medium borderline
Pcabscaffold_38120686900.1 Alkaloid 8HGO medium borderline
Pcabscaffold_4410749810.1 Alkaloid 8HGO medium pass
Pcabscaffold_4630765120.1 Alkaloid 8HGO medium borderline
Pcabscaffold_470775600.1 Alkaloid 8HGO medium borderline
Pcabscaffold_580869540.1 Alkaloid 8HGO medium borderline
Pcabscaffold_6020884540.1 Alkaloid 8HGO medium borderline
Pcabscaffold_6040884970.1 Alkaloid 8HGO medium borderline
Pcabscaffold_7520975260.1 Alkaloid 8HGO medium borderline
Pcabscaffold_7710985290.1 Alkaloid 8HGO medium borderline
Pcabscaffold_8741047670.1 Alkaloid 8HGO low borderline
Pcabscaffold_9781099400.1 Alkaloid 8HGO medium borderline