PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP719
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Gene Pathway Family Confidence Status
Pcabscaffold_105_81081-20652500035740.1 Alkaloid CYP719 medium borderline
Pcabscaffold_105_81081-20652500035950.1 Alkaloid CYP719 medium borderline
Pcabscaffold_11180060500.1 Alkaloid CYP719 medium borderline
Pcabscaffold_1250111310.1 Alkaloid CYP719 medium borderline
Pcabscaffold_15100226720.1 Alkaloid CYP719 medium borderline
Pcabscaffold_1560242810.1 Alkaloid CYP719 medium pass
Pcabscaffold_16110262190.1 Alkaloid CYP719 medium borderline
Pcabscaffold_19440361170.1 Alkaloid CYP719 medium borderline
Pcabscaffold_2040401940.1 Alkaloid CYP719 medium borderline
Pcabscaffold_21410427310.1 Alkaloid CYP719 medium borderline
Pcabscaffold_21630431120.1 Alkaloid CYP719 medium borderline
Pcabscaffold_2190436170.1 Alkaloid CYP719 medium borderline
Pcabscaffold_220_1-13634480441630.1 Alkaloid CYP719 medium borderline
Pcabscaffold_22620454880.1 Alkaloid CYP719 low borderline
Pcabscaffold_322850618160.1 Alkaloid CYP719 medium borderline
Pcabscaffold_32740623160.1 Alkaloid CYP719 medium borderline
Pcabscaffold_330_1-2591430628440.1 Alkaloid CYP719 medium borderline
Pcabscaffold_3380636740.1 Alkaloid CYP719 medium borderline
Pcabscaffold_37_1-2769220681000.1 Alkaloid CYP719 medium borderline
Pcabscaffold_3_1-26455000708870.1 Alkaloid CYP719 medium borderline
Pcabscaffold_520825280.1 Alkaloid CYP719 low borderline
Pcabscaffold_6550918800.1 Alkaloid CYP719 medium borderline
Pcabscaffold_7900995310.1 Alkaloid CYP719 medium borderline
Pcabscaffold_8321025640.1 Alkaloid CYP719 medium borderline
Pcabscaffold_921072650.1 Alkaloid CYP719 medium borderline
Pcabscaffold_961091640.1 Alkaloid CYP719 medium borderline