PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
Pcabscaffold_11120058650.1 Flavonoid DFR medium borderline
Pcabscaffold_11430069670.1 Flavonoid DFR low borderline
Pcabscaffold_122_1075706-18185570103520.1 Flavonoid DFR medium borderline
Pcabscaffold_12880126370.1 Flavonoid DFR medium borderline
Pcabscaffold_13130142550.1 Flavonoid DFR medium borderline
Pcabscaffold_1480210500.1 Flavonoid DFR medium borderline
Pcabscaffold_150217560.1 Flavonoid DFR low borderline
Pcabscaffold_1580249980.1 Flavonoid DFR medium borderline
Pcabscaffold_18130324730.1 Flavonoid DFR medium borderline
Pcabscaffold_1860336810.1 Flavonoid DFR medium borderline
Pcabscaffold_19510363200.1 Flavonoid DFR medium borderline
Pcabscaffold_19540363940.1 Flavonoid DFR medium borderline
Pcabscaffold_20383120.1 Flavonoid DFR medium borderline
Pcabscaffold_2260454070.1 Flavonoid DFR medium borderline
Pcabscaffold_2990582270.1 Flavonoid DFR medium borderline
Pcabscaffold_2990582280.1 Flavonoid DFR medium borderline
Pcabscaffold_33130629820.1 Flavonoid DFR medium borderline
Pcabscaffold_33130629830.1 Flavonoid DFR medium borderline
Pcabscaffold_3380637640.1 Flavonoid DFR medium borderline
Pcabscaffold_34840649050.1 Flavonoid DFR medium borderline
Pcabscaffold_402_19828-10181310716950.1 Flavonoid DFR medium borderline
Pcabscaffold_4_900905-60197250801620.1 Flavonoid DFR medium borderline
Pcabscaffold_530831900.1 Flavonoid DFR medium borderline
Pcabscaffold_530834060.1 Flavonoid DFR medium borderline
Pcabscaffold_530834070.1 Flavonoid DFR medium borderline
Pcabscaffold_55120849770.1 Flavonoid DFR medium borderline
Pcabscaffold_710949600.1 Flavonoid DFR medium borderline
Pcabscaffold_780989550.1 Flavonoid DFR medium borderline
Pcabscaffold_780989570.1 Flavonoid DFR medium borderline
Pcabscaffold_780989590.1 Flavonoid DFR medium borderline
Pcabscaffold_821017850.1 Flavonoid DFR medium pass
Pcabscaffold_8411030300.1 Flavonoid DFR medium borderline
Pcabscaffold_861038730.1 Flavonoid DFR medium borderline
Pcabscaffold_8671042720.1 Flavonoid DFR medium borderline
Pcabscaffold_876_1-3417211048110.1 Flavonoid DFR medium borderline
Pcabscaffold_9_15686-49974061108180.1 Flavonoid DFR medium borderline