PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
rhynchospora_pubera_mRNA71985 rhynchospora_pubera rhynchospora_pubera_mRNA71985
rhynchospora_pubera_mRNA82575 rhynchospora_pubera rhynchospora_pubera_mRNA82575
rhynchospora_pubera_mRNA83144 rhynchospora_pubera rhynchospora_pubera_mRNA83144
rhynchospora_pubera_mRNA91119 rhynchospora_pubera rhynchospora_pubera_mRNA91119
rhynchospora_tenuis_mRNA10894 rhynchospora_tenuis rhynchospora_tenuis_mRNA10894
rhynchospora_tenuis_mRNA11875 rhynchospora_tenuis rhynchospora_tenuis_mRNA11875
rhynchospora_tenuis_mRNA12510 rhynchospora_tenuis rhynchospora_tenuis_mRNA12510
rhynchospora_tenuis_mRNA4143 rhynchospora_tenuis rhynchospora_tenuis_mRNA4143
Rnatscaffold_130021670 ricciocarpus_natans Rnatscaffold_130021670
Rnatscaffold_20036770 ricciocarpus_natans Rnatscaffold_20036770
Rnatscaffold_30073880 ricciocarpus_natans Rnatscaffold_30073880
Rnatscaffold_390089770 ricciocarpus_natans Rnatscaffold_390089770
Rnatscaffold_390089790 ricciocarpus_natans Rnatscaffold_390089790
Rnatscaffold_390089920 ricciocarpus_natans Rnatscaffold_390089920
Rnatscaffold_390090240 ricciocarpus_natans Rnatscaffold_390090240
Rcom275440004970.1 ricinus_communis Rcom275440004970.1
Rcom299500162910.1 ricinus_communis Rcom299500162910.1
Rcom299820167030.1 ricinus_communis Rcom299820167030.1
robinia_pseudoacacia_CHAGGene04023 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene04023
robinia_pseudoacacia_CHAGGene07673 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene07673
robinia_pseudoacacia_CHAGGene20629 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene20629
robinia_pseudoacacia_CHAGGene20632 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene20632
robinia_pseudoacacia_CHAGGene22982 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene22982
robinia_pseudoacacia_CHAGGene23113 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene23113
robinia_pseudoacacia_CHAGGene23114 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene23114
robinia_pseudoacacia_CHAGGene24205 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene24205
robinia_pseudoacacia_CHAGGene26163 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene26163
robinia_pseudoacacia_CHAGGene32460 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene32460
robinia_pseudoacacia_CHAGGene32462 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene32462
Rgor750710036740.1 roridula_gorgonias Rgor750710036740.1