Bca_GomB03g20630.mRNA1 brassica_carinata
Protein ID: Bca_GomB03g20630.mRNA1
Record level: protein/isoform record
6
Assignments
Phylogenetic Position
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway
Phenylpropanoid pathway
→
→
Family
C4H/CYP73A
→
Library
Phenylpropanoid Official Library
→
Method
blast+hmm_conflict
Pathway
Alkaloid pathway
→
Module
Alkaloid portable pathway
→
Family
SLS
→
Library
Alkaloid Official Library
→
Method
blast+hmm_conflict
Pathway
Flavonoid pathway
→
Module
Flavonoid portable pathway
→
Family
F3'5'H/CYP75A
→
Library
Flavonoid Official Library
→
Method
blast+hmm_conflict
Pathway
Steroid pathway
→
Module
Steroid portable pathway
→
Family
BR6OX2/CYP85A2
→
Library
Steroid Official Library
→
Method
blast+hmm_conflict
Pathway
Rosmarinic acid pathway
→
→
Family
C4H
→
Library
Rosmarinic acid Official Library
→
Method
blast+hmm
Pathway
Terpenoid pathway
→
Module
Terpenoid portable pathway
→
Family
CYP76
→
Library
Terpenoid Official Library
→
Method
blast+hmm
Annotation Details
| Pathway | Module | Family | Library | Method |
|---|---|---|---|---|
| Phenylpropanoid pathway | Phenylpropanoid portable pathway | C4H/CYP73A | Phenylpropanoid Official Library | blast+hmm_conflict |
| Alkaloid pathway | Alkaloid portable pathway | SLS | Alkaloid Official Library | blast+hmm_conflict |
| Flavonoid pathway | Flavonoid portable pathway | F3'5'H/CYP75A | Flavonoid Official Library | blast+hmm_conflict |
| Steroid pathway | Steroid portable pathway | BR6OX2/CYP85A2 | Steroid Official Library | blast+hmm_conflict |
| Rosmarinic acid pathway | Rosmarinic acid portable pathway | C4H | Rosmarinic acid Official Library | blast+hmm |
| Terpenoid pathway | Terpenoid portable pathway | CYP76 | Terpenoid Official Library | blast+hmm |
Protein Sequence
MGRMKAIWGEDAWEFKPERWVSSETGGLRHEPSYKFFSFNAGPRTCLGSSWRWEDCFEGFIFRISWKYRWCLTTAGAIGG LAASLIRVPTEVVKQRMQTGQFASAPNAVRVSASQEGFRGLYAGYRSFLLRDLPFDAIQFCIYEQLCLGYKRAGARELND LRTLSLVHLLLCALTGAVTTPLDVIKTRLMVQGSAKQYQGIVDCVQTIVREEGASALLKGIGPRVLWIGIGGSIFFGVLE STKRTLAQRRPKTAKESKED