Bca_GomB06g82900.mRNA1 brassica_carinata
Protein ID: Bca_GomB06g82900.mRNA1
Record level: protein/isoform record
4
Assignments
Phylogenetic Position
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway
Alkaloid pathway
→
Module
Alkaloid portable pathway
→
Family
GES
→
Library
Alkaloid Official Library
→
Method
blast+hmm
Pathway
Terpenoid pathway
→
Module
Terpenoid portable pathway
→
Family
TPS
→
Library
Terpenoid Official Library
→
Method
blast+hmm
Pathway
Phenylpropanoid pathway
→
→
Family
CAD
→
Library
Phenylpropanoid Official Library
→
Method
blast+hmm
Pathway
Steroid pathway
→
Module
Steroid portable pathway
→
Family
CAS
→
Library
Steroid Official Library
→
Method
blast+hmm
Annotation Details
| Pathway | Module | Family | Library | Method |
|---|---|---|---|---|
| Alkaloid pathway | Alkaloid portable pathway | GES | Alkaloid Official Library | blast+hmm |
| Terpenoid pathway | Terpenoid portable pathway | TPS | Terpenoid Official Library | blast+hmm |
| Phenylpropanoid pathway | Phenylpropanoid portable pathway | CAD | Phenylpropanoid Official Library | blast+hmm |
| Steroid pathway | Steroid portable pathway | CAS | Steroid Official Library | blast+hmm |
Protein Sequence
MSSNVGTSEPSGVKKTSKRPKYSKFTQQELPACKPILTPSWVILTFLVAGVVFIPLGVICLFASQGVCALGKVRYVKSRS DAQLRSPREERDVQKCAPEDNVGGEPIVPCGLVAWSLFNDTYQFSRNSQELPVNKKDISWKSDRDSKFGKNVFPKNFQTG APIGGGTLDPNKPLSEQEDLIVWMRTGGINCQYSGSCIGKIETDLNAGDTIRVIVGEQLQHLQLQWREEARAINPSSWLG GRKRLPRGQAYLTVGSICLFLAVTFSVLYLVKPRQLGDPLYLSWNRSPGGSYDGVLVASGVSMSISSSTNLRSSPISATL ETRLEAVEHTRANNVSFEQTKEKIRKMLEKVELSVSAYDTSWVAMVPSPSSKSSPLFPQCLKWLLENQHEDGSWGLDDTH SHPSLKKDMLSSTLACILALKKWGTGERQISLQFIELHSASVTDETIQKPAGFGIIFPGMIEYARDLNLVIPLGSEVVDA MIQKRDMDLRSESVSRGREAYLVYVLEGTRKIQDWDLVGKYLRKNGSLFNSPATTAAAFTQFRNDGCLRYLSSLFQKFEA AVPTVYPFDQYARLSVIDTLESLGIDRDFKNEIRGVLDETYRCWLRGDEGICLDLATCALAFRLLLAHGYDVSYDPLKPF AEESGFSNTLEGYLKNTVSVLELFKAAQSYPHESALKEQCLWTKQYLEMELSNWPITSVQDKYLKREIEDALAFPHYASL ERLDHRRKLLRGSCVENNTRVMKTSFCFSNVCSSDILKLAVEDFNFCQSIHGEEMKRLDRWIVENRLQELKFARQKLAYC YFSGAATLFSPELSDARISWAKGGVLTTVIDDFFDVGASKEEMENLIHLVEKWDLNCVPEYCSEQVKIIFSVLRDTILET GEKAFIYQGRTVTHHIVKIWLDLLKSMLREAEWSSEKPTPSLEDYMENAYVSFALGPIVLPATYLIGPPMLEETVGSPEY NQLYQLMSTMGRLLNDIQGFKRESAQGKLNAVSLHMIHDRDNRSKEDVIEWIKGLAERKRVELQKLVLEEKGSVVPRECK EAFLKMSKVLNLFYRKDDGFTSLDLMSVVKSVMYEPATLQDESLT