PlantSME Plant secondary metabolism enzyme database

Bca_GomB07g18540.mRNA1 brassica_carinata

Protein ID: Bca_GomB07g18540.mRNA1
Record level: protein/isoform record
Species：Brassica carinata (brassica_carinata)
6
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Steroid pathway
→
Module Steroid portable pathway
→
Family CYP90D1
→
Library Steroid Official Library
→
Method blast+hmm
Pathway Rosmarinic acid pathway
→
Module Rosmarinic acid portable pathway
→
Family C4H
→
Library Rosmarinic acid Official Library
→
Method hmm
Pathway Phenylpropanoid pathway
→
Module Phenylpropanoid portable pathway
→
Family F5H/CYP84A
→
Library Phenylpropanoid Official Library
→
Method blast+hmm_conflict
Pathway Flavonoid pathway
→
Module Flavonoid portable pathway
→
Family FNS
→
Library Flavonoid Official Library
→
Method blast+hmm_conflict
Pathway Terpenoid pathway
→
Module Terpenoid portable pathway
→
Family CYP76
→
Library Terpenoid Official Library
→
Method blast+hmm
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family IO
→
Library Alkaloid Official Library
→
Method blast+hmm_conflict
Annotation Details
Pathway Module Family Library Method
Steroid pathway Steroid portable pathway CYP90D1 Steroid Official Library blast+hmm
Rosmarinic acid pathway Rosmarinic acid portable pathway C4H Rosmarinic acid Official Library hmm
Phenylpropanoid pathway Phenylpropanoid portable pathway F5H/CYP84A Phenylpropanoid Official Library blast+hmm_conflict
Flavonoid pathway Flavonoid portable pathway FNS Flavonoid Official Library blast+hmm_conflict
Terpenoid pathway Terpenoid portable pathway CYP76 Terpenoid Official Library blast+hmm
Alkaloid pathway Alkaloid portable pathway IO Alkaloid Official Library blast+hmm_conflict
Protein Sequence
MDTCSSLLLFSLFLFVIIFLIFDKIYGLRSSTASKTKLIDHVNTHGHGPMFPQGSLGWPVIGETIEFISSAYSDHPESFM
DKRRLMYGRVFKSHIFGTATIVSTDAEVNKTVLQSDPTAFVPFYPKTVRELMGKSSILLINGSLHRRFHGLVGSFLKSAL
LKAQIVKDMHKFLSESMDLWSEDQPVLLQDISKTVAFKVLAKALISVEKGEELEELKKEFEQFIKGLMSLPVNFPGTQLY
RSLQAKKKMVKQVERIIEGKVRRAKNKEEDGVIAKDVVDVLLKDSSEKLTHNLIANNMVDMMIPGHDSVPVLITLAVKFL
SDSPSALHFLTEENMELKRLKELTGEPLYWNDYLSLPFTQKVITETLRMGNVIIGVMRKAMKDVEIKGCVIPKGWCFLAY
LRSVHLDKLYYESPYKFNPWRWQERDMNTSSFSPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWTAEADTIINFPTVHM
KNKLPIWIKRR