PlantSME Plant secondary metabolism enzyme database

Acrobolbus urvilleanus (acrobolbus_urvilleanus)

Imported from atlas release summary for Acrobolbus urvilleanus.

794
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 27.46% Phenylpropanoid pathway 22.42% Terpenoid pathway 21.28% Flavonoid pathway 13.73% Rosmarinic acid pathway 9.45% Steroid pathway 5.67%
Family Distribution
C4H 6.95% C3'H/CYP98A 5.53% 4CL 5.35% CYP76 4.66% BAHD 4.62% NMT 4.07% IFS 3.2% POD 3.16%
Other Families 62.46%
More Families (93)
BR6OX2/CYP85A2 65 2.97% GS 61 2.79% UGT 53 2.42% UFGT 48 2.19% 7DLGT 47 2.15% DWF4/CYP90B1 47 2.15% T3O 46 2.1% IFR 45 2.06% H6H 44 2.01% STR 43 1.97% F3'H/CYP75B 42 1.92% F3H 41 1.87% TRI/TRII 39 1.78% COMT 39 1.78% CAD 37 1.69% IO 33 1.51% PYKS 27 1.23% FNS 26 1.19% HCT 24 1.1% G8O/G8H 22 1.01% CHS 21 0.96% SLS 18 0.82% PAL 18 0.82% ISY 17 0.78% CSE 17 0.78% CAS 17 0.78% BR6OX1/CYP85A1 17 0.78% COR 16 0.73% SMT1/SMT2/SMT3 16 0.73% RAS 15 0.69% ANS/LDOX 14 0.64% T16H 13 0.59% CODM/T6ODM 13 0.59% TAT 12 0.55% MPO 11 0.5% CYP719 11 0.5% BBE 11 0.5% LAMT 11 0.5% CPR 11 0.5% CNMT 10 0.46% ANR 10 0.46% F3'5'H/CYP75A 10 0.46% LAC 10 0.46% CYP90D1 10 0.46% TPS 9 0.41% GGPPS 9 0.41% DXS 9 0.41% GES 8 0.37% F5H/CYP84A 8 0.37% CYP80F1 7 0.32% SGD 7 0.32% DFR 7 0.32% CCR 7 0.32% SQE 7 0.32% NCS 6 0.27% PMT 6 0.27% CPD/CYP90A1 6 0.27% AACT 6 0.27% 16OMT 5 0.23% SQS/FDFT1 5 0.23% DWF1 5 0.23% MVK 5 0.23% CYP71 5 0.23% 7DLH 4 0.18% CYP80B1 4 0.18% 8HGO 4 0.18% ADC 4 0.18% TDC 4 0.18% XMT_MXMT_DXMT 4 0.18% HPPR 4 0.18% HYD1 4 0.18% CYP51G1 4 0.18% FPPS 4 0.18% DXR 4 0.18% 6OMT_4OMT_SOMT 3 0.14% CHI 3 0.14% DET2 3 0.14% ROT3/CYP90C1 3 0.14% SMO1/SMO2 3 0.14% IDI 3 0.14% MCT/IspD 3 0.14% CCoAOMT 2 0.09% FK 2 0.09% DWF7 2 0.09% MDS/IspF 2 0.09% ODC 1 0.05% CMK/IspE 1 0.05% HMGS 1 0.05% HMGR 1 0.05% HDS/IspG 1 0.05% PMK 1 0.05% MVD 1 0.05% HDR/IspH 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 218 19 NMT (38) View species results
Phenylpropanoid pathway 178 11 POD (65) View species results
Terpenoid pathway 169 17 BAHD (56) View species results
Flavonoid pathway 109 9 UFGT (46) View species results
Rosmarinic acid pathway 75 7 C4H (32) View species results
Steroid pathway 45 10 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 820 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 140 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP719
Reset
Gene Pathway Family Confidence Status Best Target
Aurv6567390024160 Alkaloid CYP719 medium borderline CYP719__00011__sp_Q948Y1_C719A_COPJA
Aurv7263910034270 Alkaloid CYP719 medium borderline CYP719__00001__sp_A0A7T9QPT0_C719A_PIPNI
Aurv7441850041900 Alkaloid CYP719 medium borderline CYP719__00002__sp_B1NF18_C719B_PAPSO
Aurv7574360048620 Alkaloid CYP719 medium borderline CYP719__00005__sp_B5UAQ8_C7195_ESCCA
Aurv7670590050390 Alkaloid CYP719 medium borderline CYP719__00002__sp_B1NF18_C719B_PAPSO
Aurv8039570075140 Alkaloid CYP719 medium borderline CYP719__00007__sp_L7T720_C719A_PODPE
Aurv8500050127440 Alkaloid CYP719 medium borderline CYP719__00005__sp_B5UAQ8_C7195_ESCCA
Aurv8650130151640 Alkaloid CYP719 medium borderline CYP719__00009__sp_Q50LH3_C7192_ESCCA
Aurv9052630267240 Alkaloid CYP719 medium borderline CYP719__00007__sp_L7T720_C719A_PODPE
Aurv9089100282620 Alkaloid CYP719 medium borderline CYP719__00003__sp_B1NF19_C719D_ARGME
Aurv9282990359590 Alkaloid CYP719 medium borderline CYP719__00004__sp_B1NF20_C719E_ARGME