PlantSME Plant secondary metabolism enzyme database

Acrobolbus urvilleanus (acrobolbus_urvilleanus)

Imported from atlas release summary for Acrobolbus urvilleanus.

794
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 27.46% Phenylpropanoid pathway 22.42% Terpenoid pathway 21.28% Flavonoid pathway 13.73% Rosmarinic acid pathway 9.45% Steroid pathway 5.67%
Family Distribution
C4H 6.95% C3'H/CYP98A 5.53% 4CL 5.35% CYP76 4.66% BAHD 4.62% NMT 4.07% IFS 3.2% POD 3.16%
Other Families 62.46%
More Families (93)
BR6OX2/CYP85A2 65 2.97% GS 61 2.79% UGT 53 2.42% UFGT 48 2.19% 7DLGT 47 2.15% DWF4/CYP90B1 47 2.15% T3O 46 2.1% IFR 45 2.06% H6H 44 2.01% STR 43 1.97% F3'H/CYP75B 42 1.92% F3H 41 1.87% TRI/TRII 39 1.78% COMT 39 1.78% CAD 37 1.69% IO 33 1.51% PYKS 27 1.23% FNS 26 1.19% HCT 24 1.1% G8O/G8H 22 1.01% CHS 21 0.96% SLS 18 0.82% PAL 18 0.82% ISY 17 0.78% CSE 17 0.78% CAS 17 0.78% BR6OX1/CYP85A1 17 0.78% COR 16 0.73% SMT1/SMT2/SMT3 16 0.73% RAS 15 0.69% ANS/LDOX 14 0.64% T16H 13 0.59% CODM/T6ODM 13 0.59% TAT 12 0.55% MPO 11 0.5% CYP719 11 0.5% BBE 11 0.5% LAMT 11 0.5% CPR 11 0.5% CNMT 10 0.46% ANR 10 0.46% F3'5'H/CYP75A 10 0.46% LAC 10 0.46% CYP90D1 10 0.46% TPS 9 0.41% GGPPS 9 0.41% DXS 9 0.41% GES 8 0.37% F5H/CYP84A 8 0.37% CYP80F1 7 0.32% SGD 7 0.32% DFR 7 0.32% CCR 7 0.32% SQE 7 0.32% NCS 6 0.27% PMT 6 0.27% CPD/CYP90A1 6 0.27% AACT 6 0.27% 16OMT 5 0.23% SQS/FDFT1 5 0.23% DWF1 5 0.23% MVK 5 0.23% CYP71 5 0.23% 7DLH 4 0.18% CYP80B1 4 0.18% 8HGO 4 0.18% ADC 4 0.18% TDC 4 0.18% XMT_MXMT_DXMT 4 0.18% HPPR 4 0.18% HYD1 4 0.18% CYP51G1 4 0.18% FPPS 4 0.18% DXR 4 0.18% 6OMT_4OMT_SOMT 3 0.14% CHI 3 0.14% DET2 3 0.14% ROT3/CYP90C1 3 0.14% SMO1/SMO2 3 0.14% IDI 3 0.14% MCT/IspD 3 0.14% CCoAOMT 2 0.09% FK 2 0.09% DWF7 2 0.09% MDS/IspF 2 0.09% ODC 1 0.05% CMK/IspE 1 0.05% HMGS 1 0.05% HMGR 1 0.05% HDS/IspG 1 0.05% PMK 1 0.05% MVD 1 0.05% HDR/IspH 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 218 19 NMT (38) View species results
Phenylpropanoid pathway 178 11 POD (65) View species results
Terpenoid pathway 169 17 BAHD (56) View species results
Flavonoid pathway 109 9 UFGT (46) View species results
Rosmarinic acid pathway 75 7 C4H (32) View species results
Steroid pathway 45 10 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 820 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 140 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Aurv7413720039680 Rosmarinic Acid RAS low borderline
Aurv7820900059940 Rosmarinic Acid RAS low borderline
Aurv7931030069280 Rosmarinic Acid RAS low borderline
Aurv7996790073150 Rosmarinic Acid RAS medium pass
Aurv8097440080140 Rosmarinic Acid RAS medium pass
Aurv8261830097950 Rosmarinic Acid RAS low borderline
Aurv8282780099750 Rosmarinic Acid RAS low borderline
Aurv8515040129240 Rosmarinic Acid RAS low borderline
Aurv8561760137870 Rosmarinic Acid RAS medium pass
Aurv8650750151730 Rosmarinic Acid RAS low borderline
Aurv8884350207560 Rosmarinic Acid RAS low borderline
Aurv8892670210330 Rosmarinic Acid RAS medium pass
Aurv9033880259190 Rosmarinic Acid RAS medium pass
Aurv9090880283560 Rosmarinic Acid RAS low borderline
Aurv9204070331620 Rosmarinic Acid RAS low borderline