Acrobolbus urvilleanus (acrobolbus_urvilleanus)
Imported from atlas release summary for Acrobolbus urvilleanus.
794
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
794
Candidate Genes
C4H
6.95%
C3'H/CYP98A
5.53%
4CL
5.35%
CYP76
4.66%
BAHD
4.62%
NMT
4.07%
IFS
3.2%
POD
3.16%
Other Families
62.46%
More Families (93)
BR6OX2/CYP85A2
65
2.97%
GS
61
2.79%
UGT
53
2.42%
UFGT
48
2.19%
7DLGT
47
2.15%
DWF4/CYP90B1
47
2.15%
T3O
46
2.1%
IFR
45
2.06%
H6H
44
2.01%
STR
43
1.97%
F3'H/CYP75B
42
1.92%
F3H
41
1.87%
TRI/TRII
39
1.78%
COMT
39
1.78%
CAD
37
1.69%
IO
33
1.51%
PYKS
27
1.23%
FNS
26
1.19%
HCT
24
1.1%
G8O/G8H
22
1.01%
CHS
21
0.96%
SLS
18
0.82%
PAL
18
0.82%
ISY
17
0.78%
CSE
17
0.78%
CAS
17
0.78%
BR6OX1/CYP85A1
17
0.78%
COR
16
0.73%
SMT1/SMT2/SMT3
16
0.73%
RAS
15
0.69%
ANS/LDOX
14
0.64%
T16H
13
0.59%
CODM/T6ODM
13
0.59%
TAT
12
0.55%
MPO
11
0.5%
CYP719
11
0.5%
BBE
11
0.5%
LAMT
11
0.5%
CPR
11
0.5%
CNMT
10
0.46%
ANR
10
0.46%
F3'5'H/CYP75A
10
0.46%
LAC
10
0.46%
CYP90D1
10
0.46%
TPS
9
0.41%
GGPPS
9
0.41%
DXS
9
0.41%
GES
8
0.37%
F5H/CYP84A
8
0.37%
CYP80F1
7
0.32%
SGD
7
0.32%
DFR
7
0.32%
CCR
7
0.32%
SQE
7
0.32%
NCS
6
0.27%
PMT
6
0.27%
CPD/CYP90A1
6
0.27%
AACT
6
0.27%
16OMT
5
0.23%
SQS/FDFT1
5
0.23%
DWF1
5
0.23%
MVK
5
0.23%
CYP71
5
0.23%
7DLH
4
0.18%
CYP80B1
4
0.18%
8HGO
4
0.18%
ADC
4
0.18%
TDC
4
0.18%
XMT_MXMT_DXMT
4
0.18%
HPPR
4
0.18%
HYD1
4
0.18%
CYP51G1
4
0.18%
FPPS
4
0.18%
DXR
4
0.18%
6OMT_4OMT_SOMT
3
0.14%
CHI
3
0.14%
DET2
3
0.14%
ROT3/CYP90C1
3
0.14%
SMO1/SMO2
3
0.14%
IDI
3
0.14%
MCT/IspD
3
0.14%
CCoAOMT
2
0.09%
FK
2
0.09%
DWF7
2
0.09%
MDS/IspF
2
0.09%
ODC
1
0.05%
CMK/IspE
1
0.05%
HMGS
1
0.05%
HMGR
1
0.05%
HDS/IspG
1
0.05%
PMK
1
0.05%
MVD
1
0.05%
HDR/IspH
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 218 | 19 | NMT (38) | View species results |
| Phenylpropanoid pathway | 178 | 11 | POD (65) | View species results |
| Terpenoid pathway | 169 | 17 | BAHD (56) | View species results |
| Flavonoid pathway | 109 | 9 | UFGT (46) | View species results |
| Rosmarinic acid pathway | 75 | 7 | C4H (32) | View species results |
| Steroid pathway | 45 | 10 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 820 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 140 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aurv11070000490 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv6477730021660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv7107640029020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv7797650058000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8024290074500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8087780079300 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8145260084960 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8152600085830 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8215270094130 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8368690109910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8389940113230 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8521220130380 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8555790136970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8576360139770 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8644020150190 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8645460150610 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8659480153750 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8678830157860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8728500168020 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aurv8759800175880 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8781230180590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8815590189550 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8893260210510 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aurv8900720213060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8957300230250 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv8987230242100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9021340254840 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9052470267150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9056450268460 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aurv9064390271830 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aurv9077910277660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9079370278220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9111430292560 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9112640293220 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9120930297310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9123260298280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9167320317330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9174600320500 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9195190328560 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9257060350710 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9279540358300 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9299950365740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aurv9302370366410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |