Angelica sinensis (angelica_sinensis)
Imported from atlas release summary for Angelica sinensis.
2030
Candidate Protein Records
1613
Pathway-Level Records
4298
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4298
Family-Level Calls
C4H
6.68%
C3'H/CYP98A
6.28%
BAHD
5.26%
UGT
4.26%
IFS
3.84%
CYP76
3.84%
7DLGT
3.65%
4CL
3.56%
Other Families
62.63%
More Families (97)
T3O
145
3.37%
POD
142
3.3%
UFGT
140
3.26%
F3H
122
2.84%
F3'H/CYP75B
116
2.7%
DWF4/CYP90B1
108
2.51%
BR6OX2/CYP85A2
97
2.26%
NMT
93
2.16%
CODM/T6ODM
79
1.84%
STR
71
1.65%
BBE
71
1.65%
CYP71
70
1.63%
SMT1/SMT2/SMT3
60
1.4%
H6H
54
1.26%
CAD
54
1.26%
T16H
49
1.14%
CSE
47
1.09%
CAS
46
1.07%
7DLH
44
1.02%
G8O/G8H
44
1.02%
TRI/TRII
40
0.93%
IFR
38
0.88%
TPS
37
0.86%
HCT
36
0.84%
LAC
35
0.81%
PYKS
33
0.77%
TAT
32
0.74%
CYP90D1
32
0.74%
GES
31
0.72%
F3'5'H/CYP75A
31
0.72%
F5H/CYP84A
31
0.72%
GS
30
0.7%
IO
30
0.7%
SLS
28
0.65%
FNS
27
0.63%
RAS
27
0.63%
PMT
26
0.6%
COMT
26
0.6%
CPD/CYP90A1
26
0.6%
COR
24
0.56%
NCS
21
0.49%
ANR
20
0.47%
CCR
19
0.44%
CYP51G1
17
0.4%
BR6OX1/CYP85A1
17
0.4%
SGD
16
0.37%
LAMT
16
0.37%
8HGO
14
0.33%
ISY
14
0.33%
16OMT
13
0.3%
ANS/LDOX
13
0.3%
DFR
13
0.3%
ROT3/CYP90C1
13
0.3%
CYP719
12
0.28%
MPO
12
0.28%
PAL
12
0.28%
FPPS
12
0.28%
CHS
11
0.26%
CNMT
9
0.21%
CPR
9
0.21%
TYDC_DDC
8
0.19%
GGPPS
8
0.19%
SQE
7
0.16%
SQS/FDFT1
7
0.16%
CPI1
7
0.16%
CYP80B1
6
0.14%
CCoAOMT
6
0.14%
XMT_MXMT_DXMT
5
0.12%
FLS
5
0.12%
HPPR
5
0.12%
MVK
5
0.12%
HMGS
5
0.12%
DXS
5
0.12%
HDR/IspH
5
0.12%
DET2
4
0.09%
DWF1
4
0.09%
AACT
4
0.09%
MVD
4
0.09%
PMK
4
0.09%
CHI
3
0.07%
HYD1
3
0.07%
HMGR
3
0.07%
MCT/IspD
3
0.07%
6OMT_4OMT_SOMT
2
0.05%
TDC
2
0.05%
ADC
2
0.05%
SMO1/SMO2
2
0.05%
FK
2
0.05%
CMK/IspE
2
0.05%
HDS/IspG
2
0.05%
CYP80F1
1
0.02%
ODC
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 478 | 19 | BAHD (172) | View species results |
| Alkaloid pathway | 405 | 24 | 7DLGT (76) | View species results |
| Phenylpropanoid pathway | 298 | 11 | POD (134) | View species results |
| Flavonoid pathway | 203 | 9 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 124 | 7 | C4H (47) | View species results |
| Steroid pathway | 105 | 11 | CAS (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1804 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 289 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| angelica_sinensis_AS08G03577-RA | Alkaloid | BBE | medium | borderline | BBE__00003__sp_F1T161_BBLC1_TOBAC |
| angelica_sinensis_AS08G03580-RA | Alkaloid | BBE | medium | borderline | BBE__00003__sp_F1T161_BBLC1_TOBAC |
| angelica_sinensis_AS09G00884-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS09G00885-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS09G00886-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS09G01990-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS09G02015-RA | Alkaloid | BBE | medium | borderline | BBE__00005__sp_Q93ZA3_BBE13_ARATH |
| angelica_sinensis_AS09G02016-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS10G01245-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS10G01251-RA | Alkaloid | BBE | medium | borderline | BBE__00007__sp_Q9FZC4_FOX1_ARATH |
| angelica_sinensis_AS10G01252-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS10G01846-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS10G01850-RA | Alkaloid | BBE | medium | borderline | BBE__00002__sp_F1T160_BBLA_TOBAC |
| angelica_sinensis_AS10G02725-RA | Alkaloid | BBE | medium | borderline | BBE__00005__sp_Q93ZA3_BBE13_ARATH |
| angelica_sinensis_AS11G00729-RA | Alkaloid | BBE | medium | borderline | BBE__00005__sp_Q93ZA3_BBE13_ARATH |
| angelica_sinensis_AS11G00730-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS11G00731-RA | Alkaloid | BBE | medium | borderline | BBE__00005__sp_Q93ZA3_BBE13_ARATH |
| angelica_sinensis_AS11G00732-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS11G00735-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |
| angelica_sinensis_AS11G02073-RA | Alkaloid | BBE | medium | borderline | BBE__00006__sp_Q9FI21_BBE28_ARATH |
| angelica_sinensis_AS11G02627-RA | Alkaloid | BBE | medium | borderline | BBE__00004__sp_O64743_BBE15_ARATH |