PlantSME Plant secondary metabolism enzyme database

Areca catechu (areca_catechu)

Imported from atlas release summary for Areca catechu.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.67% Alkaloid pathway 21.86% Phenylpropanoid pathway 21.78% Flavonoid pathway 13.62% Rosmarinic acid pathway 9.95% Steroid pathway 6.12%
Family Distribution
BAHD 5.74% C4H 5.51% C3'H/CYP98A 5.29% 4CL 5.0% POD 4.26% UGT 3.49% IFS 3.4% 7DLGT 3.17%
Other Families 64.13%
More Families (96)
UFGT 97 3.11% CYP76 93 2.98% NMT 86 2.76% T3O 80 2.56% F3H 77 2.47% DWF4/CYP90B1 75 2.4% BR6OX2/CYP85A2 57 1.83% F3'H/CYP75B 54 1.73% STR 53 1.7% CODM/T6ODM 52 1.67% CAD 52 1.67% SMT1/SMT2/SMT3 47 1.51% PYKS 45 1.44% CAS 43 1.38% CSE 40 1.28% CYP71 40 1.28% TRI/TRII 39 1.25% LAC 39 1.25% TPS 37 1.19% GES 36 1.15% PMT 35 1.12% IO 30 0.96% ANR 30 0.96% CCR 30 0.96% RAS 30 0.96% HCT 28 0.9% H6H 27 0.87% FNS 27 0.87% GS 26 0.83% G8O/G8H 26 0.83% T16H 25 0.8% IFR 25 0.8% CHS 21 0.67% SGD 20 0.64% COMT 20 0.64% CYP90D1 20 0.64% F3'5'H/CYP75A 18 0.58% SLS 17 0.54% BBE 17 0.54% DFR 17 0.54% 7DLH 15 0.48% 16OMT 15 0.48% F5H/CYP84A 15 0.48% CPR 15 0.48% FPPS 15 0.48% NCS 12 0.38% 8HGO 12 0.38% PAL 12 0.38% BR6OX1/CYP85A1 12 0.38% CYP51G1 12 0.38% AACT 12 0.38% CPD/CYP90A1 11 0.35% LAMT 10 0.32% CYP719 9 0.29% COR 9 0.29% CNMT 9 0.29% CCoAOMT 9 0.29% HPPR 9 0.29% TAT 9 0.29% ISY 8 0.26% ADC 8 0.26% CYP80B1 8 0.26% ANS/LDOX 7 0.22% SMO1/SMO2 7 0.22% GGPPS 7 0.22% CHI 6 0.19% ROT3/CYP90C1 6 0.19% HMGR 6 0.19% MPO 5 0.16% TYDC_DDC 5 0.16% SQS/FDFT1 5 0.16% IDI 5 0.16% DXS 5 0.16% TDC 4 0.13% DET2 4 0.13% SQE 4 0.13% MVK 4 0.13% MCT/IspD 4 0.13% ODC 3 0.1% DWF1 3 0.1% HYD1 3 0.1% CMK/IspE 3 0.1% HDR/IspH 3 0.1% HMGS 3 0.1% MVD 3 0.1% PMK 3 0.1% XMT_MXMT_DXMT 2 0.06% 6OMT_4OMT_SOMT 2 0.06% DWF7 2 0.06% DWF5 2 0.06% DXR 2 0.06% HDS/IspG 2 0.06% FLS 1 0.03% CPI1 1 0.03% FK 1 0.03% MDS/IspF 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 327 19 BAHD (126) View species results
Alkaloid pathway 268 24 NMT (37) View species results
Phenylpropanoid pathway 267 12 POD (114) View species results
Flavonoid pathway 167 13 UFGT (83) View species results
Rosmarinic acid pathway 122 7 C4H (43) View species results
Steroid pathway 75 13 CAS (31) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1066 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 237 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
Acat01G0006610 Alkaloid COR low borderline COR__00005__sp_Q9SQ70_COR11_PAPSO
Acat02G0002240 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Acat06G0011610 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Acat08G0008430 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Acat09G0019910 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Acat11G0006210 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Acat11G0006230 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Acat11G0022490 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Acat13G0017880 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO