Areca catechu (areca_catechu)
Imported from atlas release summary for Areca catechu.
1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1226
Candidate Genes
BAHD
5.74%
C4H
5.51%
C3'H/CYP98A
5.29%
4CL
5.0%
POD
4.26%
UGT
3.49%
IFS
3.4%
7DLGT
3.17%
Other Families
64.13%
More Families (96)
UFGT
97
3.11%
CYP76
93
2.98%
NMT
86
2.76%
T3O
80
2.56%
F3H
77
2.47%
DWF4/CYP90B1
75
2.4%
BR6OX2/CYP85A2
57
1.83%
F3'H/CYP75B
54
1.73%
STR
53
1.7%
CODM/T6ODM
52
1.67%
CAD
52
1.67%
SMT1/SMT2/SMT3
47
1.51%
PYKS
45
1.44%
CAS
43
1.38%
CSE
40
1.28%
CYP71
40
1.28%
TRI/TRII
39
1.25%
LAC
39
1.25%
TPS
37
1.19%
GES
36
1.15%
PMT
35
1.12%
IO
30
0.96%
ANR
30
0.96%
CCR
30
0.96%
RAS
30
0.96%
HCT
28
0.9%
H6H
27
0.87%
FNS
27
0.87%
GS
26
0.83%
G8O/G8H
26
0.83%
T16H
25
0.8%
IFR
25
0.8%
CHS
21
0.67%
SGD
20
0.64%
COMT
20
0.64%
CYP90D1
20
0.64%
F3'5'H/CYP75A
18
0.58%
SLS
17
0.54%
BBE
17
0.54%
DFR
17
0.54%
7DLH
15
0.48%
16OMT
15
0.48%
F5H/CYP84A
15
0.48%
CPR
15
0.48%
FPPS
15
0.48%
NCS
12
0.38%
8HGO
12
0.38%
PAL
12
0.38%
BR6OX1/CYP85A1
12
0.38%
CYP51G1
12
0.38%
AACT
12
0.38%
CPD/CYP90A1
11
0.35%
LAMT
10
0.32%
CYP719
9
0.29%
COR
9
0.29%
CNMT
9
0.29%
CCoAOMT
9
0.29%
HPPR
9
0.29%
TAT
9
0.29%
ISY
8
0.26%
ADC
8
0.26%
CYP80B1
8
0.26%
ANS/LDOX
7
0.22%
SMO1/SMO2
7
0.22%
GGPPS
7
0.22%
CHI
6
0.19%
ROT3/CYP90C1
6
0.19%
HMGR
6
0.19%
MPO
5
0.16%
TYDC_DDC
5
0.16%
SQS/FDFT1
5
0.16%
IDI
5
0.16%
DXS
5
0.16%
TDC
4
0.13%
DET2
4
0.13%
SQE
4
0.13%
MVK
4
0.13%
MCT/IspD
4
0.13%
ODC
3
0.1%
DWF1
3
0.1%
HYD1
3
0.1%
CMK/IspE
3
0.1%
HDR/IspH
3
0.1%
HMGS
3
0.1%
MVD
3
0.1%
PMK
3
0.1%
XMT_MXMT_DXMT
2
0.06%
6OMT_4OMT_SOMT
2
0.06%
DWF7
2
0.06%
DWF5
2
0.06%
DXR
2
0.06%
HDS/IspG
2
0.06%
FLS
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 327 | 19 | BAHD (126) | View species results |
| Alkaloid pathway | 268 | 24 | NMT (37) | View species results |
| Phenylpropanoid pathway | 267 | 12 | POD (114) | View species results |
| Flavonoid pathway | 167 | 13 | UFGT (83) | View species results |
| Rosmarinic acid pathway | 122 | 7 | C4H (43) | View species results |
| Steroid pathway | 75 | 13 | CAS (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1066 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 237 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Acat01G0017130 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Acat01G0017150 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Acat01G0019740 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Acat01G0020070 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Acat02G0009380 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Acat02G0010870 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Acat02G0016520 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Acat03G0002630 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Acat03G0011740 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Acat03G0012130 | Alkaloid | NMT | low | borderline | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Acat03G0012750 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Acat03G0013160 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Acat03G0014580 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Acat03G0014900 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Acat03G0018670 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Acat04G0008970 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Acat04G0011920 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Acat04G0013320 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Acat04G0014120 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Acat05G0001140 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Acat05G0001500 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| Acat05G0001800 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Acat05G0002380 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Acat05G0002710 | Alkaloid | NMT | medium | borderline | NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ |
| Acat05G0004240 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Acat05G0005460 | Alkaloid | NMT | low | borderline | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Acat05G0011110 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Acat05G0013480 | Alkaloid | NMT | low | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| Acat06G0000140 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Acat06G0003220 | Alkaloid | NMT | low | borderline | NMT__00063__sp_Q9SEH4_PMT4_TOBAC |
| Acat06G0006890 | Alkaloid | NMT | medium | pass | NMT__00027__sp_Q10MI4_EZ1_ORYSJ |
| Acat07G0001680 | Alkaloid | NMT | medium | borderline | NMT__00064__sp_Q9SEH5_PMT3_TOBAC |
| Acat07G0005800 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Acat07G0007380 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Acat07G0008560 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Acat08G0009030 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Acat08G0010060 | Alkaloid | NMT | medium | pass | NMT__00034__sp_Q5VN06_CLF_ORYSJ |
| Acat09G0001600 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Acat09G0001640 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Acat09G0002880 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Acat09G0005930 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Acat09G0012310 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Acat09G0012980 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Acat09G0018980 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Acat09G0020300 | Alkaloid | NMT | medium | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| Acat09G0020620 | Alkaloid | NMT | low | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Acat09G0023250 | Alkaloid | NMT | low | borderline | NMT__00064__sp_Q9SEH5_PMT3_TOBAC |
| Acat09G0023380 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Acat10G0002930 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Acat10G0006290 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |