Areca catechu (areca_catechu)
Imported from atlas release summary for Areca catechu.
1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1226
Candidate Genes
BAHD
5.74%
C4H
5.51%
C3'H/CYP98A
5.29%
4CL
5.0%
POD
4.26%
UGT
3.49%
IFS
3.4%
7DLGT
3.17%
Other Families
64.13%
More Families (96)
UFGT
97
3.11%
CYP76
93
2.98%
NMT
86
2.76%
T3O
80
2.56%
F3H
77
2.47%
DWF4/CYP90B1
75
2.4%
BR6OX2/CYP85A2
57
1.83%
F3'H/CYP75B
54
1.73%
STR
53
1.7%
CODM/T6ODM
52
1.67%
CAD
52
1.67%
SMT1/SMT2/SMT3
47
1.51%
PYKS
45
1.44%
CAS
43
1.38%
CSE
40
1.28%
CYP71
40
1.28%
TRI/TRII
39
1.25%
LAC
39
1.25%
TPS
37
1.19%
GES
36
1.15%
PMT
35
1.12%
IO
30
0.96%
ANR
30
0.96%
CCR
30
0.96%
RAS
30
0.96%
HCT
28
0.9%
H6H
27
0.87%
FNS
27
0.87%
GS
26
0.83%
G8O/G8H
26
0.83%
T16H
25
0.8%
IFR
25
0.8%
CHS
21
0.67%
SGD
20
0.64%
COMT
20
0.64%
CYP90D1
20
0.64%
F3'5'H/CYP75A
18
0.58%
SLS
17
0.54%
BBE
17
0.54%
DFR
17
0.54%
7DLH
15
0.48%
16OMT
15
0.48%
F5H/CYP84A
15
0.48%
CPR
15
0.48%
FPPS
15
0.48%
NCS
12
0.38%
8HGO
12
0.38%
PAL
12
0.38%
BR6OX1/CYP85A1
12
0.38%
CYP51G1
12
0.38%
AACT
12
0.38%
CPD/CYP90A1
11
0.35%
LAMT
10
0.32%
CYP719
9
0.29%
COR
9
0.29%
CNMT
9
0.29%
CCoAOMT
9
0.29%
HPPR
9
0.29%
TAT
9
0.29%
ISY
8
0.26%
ADC
8
0.26%
CYP80B1
8
0.26%
ANS/LDOX
7
0.22%
SMO1/SMO2
7
0.22%
GGPPS
7
0.22%
CHI
6
0.19%
ROT3/CYP90C1
6
0.19%
HMGR
6
0.19%
MPO
5
0.16%
TYDC_DDC
5
0.16%
SQS/FDFT1
5
0.16%
IDI
5
0.16%
DXS
5
0.16%
TDC
4
0.13%
DET2
4
0.13%
SQE
4
0.13%
MVK
4
0.13%
MCT/IspD
4
0.13%
ODC
3
0.1%
DWF1
3
0.1%
HYD1
3
0.1%
CMK/IspE
3
0.1%
HDR/IspH
3
0.1%
HMGS
3
0.1%
MVD
3
0.1%
PMK
3
0.1%
XMT_MXMT_DXMT
2
0.06%
6OMT_4OMT_SOMT
2
0.06%
DWF7
2
0.06%
DWF5
2
0.06%
DXR
2
0.06%
HDS/IspG
2
0.06%
FLS
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 327 | 19 | BAHD (126) | View species results |
| Alkaloid pathway | 268 | 24 | NMT (37) | View species results |
| Phenylpropanoid pathway | 267 | 12 | POD (114) | View species results |
| Flavonoid pathway | 167 | 13 | UFGT (83) | View species results |
| Rosmarinic acid pathway | 122 | 7 | C4H (43) | View species results |
| Steroid pathway | 75 | 13 | CAS (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1066 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 237 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Acat01G0002420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat01G0002490 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat01G0002510 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Acat01G0010890 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat02G0001410 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat02G0007060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat02G0007070 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat02G0007080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat02G0009100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat03G0002120 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Acat03G0004430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat03G0004440 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat04G0012550 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat05G0000060 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat06G0010210 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat07G0002740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat07G0004660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat07G0007690 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat08G0010520 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat08G0014320 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat08G0016820 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Acat09G0014080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat09G0014470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat09G0017040 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat09G0019200 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Acat10G0000810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat10G0000820 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat10G0018460 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Acat10G0024660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat10G0026910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0000280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0013780 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0017630 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0020350 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0020390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0023340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0023390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat11G0023400 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat12G0010180 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat12G0012300 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Acat12G0014350 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat12G0014920 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat12G0014930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat13G0018170 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat14G0014320 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat14G0017510 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat15G0000490 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat15G0006440 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat15G0012040 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acat15G0013330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |