PlantSME Plant secondary metabolism enzyme database

Atrichum angustatum (atrichum_angustatum)

Imported from atlas release summary for Atrichum angustatum.

627
Candidate Genes
99
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.36% Terpenoid pathway 23.92% Alkaloid pathway 19.94% Rosmarinic acid pathway 12.76% Flavonoid pathway 12.6% Steroid pathway 5.42%
Family Distribution
C4H 7.73% C3'H/CYP98A 6.75% CYP76 5.31% BAHD 4.85% 4CL 4.5% NMT 4.44% POD 4.15% PAL 3.64%
Other Families 58.63%
More Families (91)
IFS 61 3.52% BR6OX2/CYP85A2 48 2.77% T3O 47 2.71% DWF4/CYP90B1 43 2.48% STR 42 2.42% F3H 38 2.19% F3'H/CYP75B 37 2.14% IFR 31 1.79% GS 28 1.62% CODM/T6ODM 28 1.62% UGT 27 1.56% UFGT 26 1.5% 7DLGT 25 1.44% T16H 24 1.38% F3'5'H/CYP75A 23 1.33% LAC 23 1.33% PYKS 22 1.27% IO 21 1.21% SGD 20 1.15% SMT1/SMT2/SMT3 18 1.04% CYP71 17 0.98% CHS 16 0.92% H6H 14 0.81% SLS 14 0.81% FNS 14 0.81% TRI/TRII 13 0.75% COMT 13 0.75% CSE 12 0.69% CAD 11 0.63% G8O/G8H 10 0.58% RAS 10 0.58% BR6OX1/CYP85A1 10 0.58% CYP80B1 9 0.52% 7DLH 9 0.52% HCT 9 0.52% MPO 8 0.46% ANR 8 0.46% F5H/CYP84A 8 0.46% CAS 8 0.46% CYP90D1 8 0.46% CPD/CYP90A1 8 0.46% AACT 8 0.46% CNMT 7 0.4% DXS 7 0.4% 8HGO 6 0.35% NCS 6 0.35% BBE 5 0.29% COR 5 0.29% 16OMT 5 0.29% CCR 5 0.29% CPR 5 0.29% ROT3/CYP90C1 5 0.29% GGPPS 5 0.29% PMT 4 0.23% FLS 4 0.23% SQS/FDFT1 4 0.23% DET2 4 0.23% DWF1 4 0.23% TYDC_DDC 3 0.17% CYP719 3 0.17% ADC 3 0.17% CHI 3 0.17% DFR 3 0.17% ANS/LDOX 3 0.17% TAT 3 0.17% SMO1/SMO2 3 0.17% DWF5 3 0.17% FPPS 3 0.17% MVD 3 0.17% ODC 2 0.12% LAMT 2 0.12% TDC 2 0.12% CCoAOMT 2 0.12% SQE 2 0.12% CPI1 2 0.12% MCT/IspD 2 0.12% HMGS 2 0.12% MVK 2 0.12% HMGR 2 0.12% HDR/IspH 2 0.12% HPPR 1 0.06% HYD1 1 0.06% FK 1 0.06% CYP51G1 1 0.06% DWF7 1 0.06% DXR 1 0.06% IDI 1 0.06% HDS/IspG 1 0.06% PMK 1 0.06% CMK/IspE 1 0.06% MDS/IspF 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 159 11 POD (67) View species results
Terpenoid pathway 150 18 BAHD (58) View species results
Alkaloid pathway 125 16 NMT (24) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Flavonoid pathway 79 8 UFGT (25) View species results
Steroid pathway 34 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 749 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
ANangscaffold_10002330 Alkaloid GS medium pass
ANangscaffold_10017990 Alkaloid GS medium pass
ANangscaffold_10034900 Alkaloid GS medium pass
ANangscaffold_10036280 Alkaloid GS high pass
ANangscaffold_10036410 Alkaloid GS high pass
ANangscaffold_10048500 Alkaloid GS high pass
ANangscaffold_20054420 Alkaloid GS low borderline
ANangscaffold_20067270 Alkaloid GS low borderline
ANangscaffold_20071530 Alkaloid GS low borderline
ANangscaffold_20087340 Alkaloid GS low borderline
ANangscaffold_40132850 Alkaloid GS low borderline
ANangscaffold_40135530 Alkaloid GS low borderline
ANangscaffold_40141220 Alkaloid GS low borderline
ANangscaffold_40142700 Alkaloid GS low borderline
ANangscaffold_40153490 Alkaloid GS low borderline
ANangscaffold_40153510 Alkaloid GS low borderline
ANangscaffold_40153770 Alkaloid GS low borderline
ANangscaffold_40153830 Alkaloid GS low borderline
ANangscaffold_40153840 Alkaloid GS low borderline
ANangscaffold_50155310 Alkaloid GS medium pass
ANangscaffold_50163200 Alkaloid GS low borderline
ANangscaffold_50169290 Alkaloid GS low borderline
ANangscaffold_60191610 Alkaloid GS low borderline
ANangscaffold_60193380 Alkaloid GS high pass
ANangscaffold_60193900 Alkaloid GS low borderline
ANangscaffold_60205060 Alkaloid GS low borderline
ANangscaffold_60205090 Alkaloid GS low borderline
ANangscaffold_70226540 Alkaloid GS low borderline