Atrichum angustatum (atrichum_angustatum)
Imported from atlas release summary for Atrichum angustatum.
627
Candidate Genes
99
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
627
Candidate Genes
C4H
7.73%
C3'H/CYP98A
6.75%
CYP76
5.31%
BAHD
4.85%
4CL
4.5%
NMT
4.44%
POD
4.15%
PAL
3.64%
Other Families
58.63%
More Families (91)
IFS
61
3.52%
BR6OX2/CYP85A2
48
2.77%
T3O
47
2.71%
DWF4/CYP90B1
43
2.48%
STR
42
2.42%
F3H
38
2.19%
F3'H/CYP75B
37
2.14%
IFR
31
1.79%
GS
28
1.62%
CODM/T6ODM
28
1.62%
UGT
27
1.56%
UFGT
26
1.5%
7DLGT
25
1.44%
T16H
24
1.38%
F3'5'H/CYP75A
23
1.33%
LAC
23
1.33%
PYKS
22
1.27%
IO
21
1.21%
SGD
20
1.15%
SMT1/SMT2/SMT3
18
1.04%
CYP71
17
0.98%
CHS
16
0.92%
H6H
14
0.81%
SLS
14
0.81%
FNS
14
0.81%
TRI/TRII
13
0.75%
COMT
13
0.75%
CSE
12
0.69%
CAD
11
0.63%
G8O/G8H
10
0.58%
RAS
10
0.58%
BR6OX1/CYP85A1
10
0.58%
CYP80B1
9
0.52%
7DLH
9
0.52%
HCT
9
0.52%
MPO
8
0.46%
ANR
8
0.46%
F5H/CYP84A
8
0.46%
CAS
8
0.46%
CYP90D1
8
0.46%
CPD/CYP90A1
8
0.46%
AACT
8
0.46%
CNMT
7
0.4%
DXS
7
0.4%
8HGO
6
0.35%
NCS
6
0.35%
BBE
5
0.29%
COR
5
0.29%
16OMT
5
0.29%
CCR
5
0.29%
CPR
5
0.29%
ROT3/CYP90C1
5
0.29%
GGPPS
5
0.29%
PMT
4
0.23%
FLS
4
0.23%
SQS/FDFT1
4
0.23%
DET2
4
0.23%
DWF1
4
0.23%
TYDC_DDC
3
0.17%
CYP719
3
0.17%
ADC
3
0.17%
CHI
3
0.17%
DFR
3
0.17%
ANS/LDOX
3
0.17%
TAT
3
0.17%
SMO1/SMO2
3
0.17%
DWF5
3
0.17%
FPPS
3
0.17%
MVD
3
0.17%
ODC
2
0.12%
LAMT
2
0.12%
TDC
2
0.12%
CCoAOMT
2
0.12%
SQE
2
0.12%
CPI1
2
0.12%
MCT/IspD
2
0.12%
HMGS
2
0.12%
MVK
2
0.12%
HMGR
2
0.12%
HDR/IspH
2
0.12%
HPPR
1
0.06%
HYD1
1
0.06%
FK
1
0.06%
CYP51G1
1
0.06%
DWF7
1
0.06%
DXR
1
0.06%
IDI
1
0.06%
HDS/IspG
1
0.06%
PMK
1
0.06%
CMK/IspE
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 159 | 11 | POD (67) | View species results |
| Terpenoid pathway | 150 | 18 | BAHD (58) | View species results |
| Alkaloid pathway | 125 | 16 | NMT (24) | View species results |
| Rosmarinic acid pathway | 80 | 7 | C4H (38) | View species results |
| Flavonoid pathway | 79 | 8 | UFGT (25) | View species results |
| Steroid pathway | 34 | 12 | CAS (8) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 749 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 103 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| ANangscaffold_10003830 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_10004540 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_10015830 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_10027930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_10038780 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_10038810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_10040500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_10045480 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_20054340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20064060 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_20064870 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20081540 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20085020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20085790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20088460 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_20089730 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20089810 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20094120 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_20095160 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_30101590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_30101610 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_30104880 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_30109350 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_30115000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_30116340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_30122750 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_40133380 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_40138900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_40150810 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_40153350 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_50157010 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_50157020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_50163480 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_50164700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_50172680 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_50172690 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_50179510 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_60196720 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_60208310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_70216410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ANangscaffold_70228100 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ANangscaffold_70245590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |