Atrichum angustatum (atrichum_angustatum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 25.36% Terpenoid pathway 23.92% Alkaloid pathway 19.94% Rosmarinic acid pathway 12.76% Flavonoid pathway 12.6% Steroid pathway 5.42%

Family Distribution

627 Candidate Genes

C4H 7.73% C3'H/CYP98A 6.75% CYP76 5.31% BAHD 4.85% 4CL 4.5% NMT 4.44% POD 4.15% PAL 3.64%

Other Families 58.63%

More Families (91)

IFS 61 3.52% BR6OX2/CYP85A2 48 2.77% T3O 47 2.71% DWF4/CYP90B1 43 2.48% STR 42 2.42% F3H 38 2.19% F3'H/CYP75B 37 2.14% IFR 31 1.79% GS 28 1.62% CODM/T6ODM 28 1.62% UGT 27 1.56% UFGT 26 1.5% 7DLGT 25 1.44% T16H 24 1.38% F3'5'H/CYP75A 23 1.33% LAC 23 1.33% PYKS 22 1.27% IO 21 1.21% SGD 20 1.15% SMT1/SMT2/SMT3 18 1.04% CYP71 17 0.98% CHS 16 0.92% H6H 14 0.81% SLS 14 0.81% FNS 14 0.81% TRI/TRII 13 0.75% COMT 13 0.75% CSE 12 0.69% CAD 11 0.63% G8O/G8H 10 0.58% RAS 10 0.58% BR6OX1/CYP85A1 10 0.58% CYP80B1 9 0.52% 7DLH 9 0.52% HCT 9 0.52% MPO 8 0.46% ANR 8 0.46% F5H/CYP84A 8 0.46% CAS 8 0.46% CYP90D1 8 0.46% CPD/CYP90A1 8 0.46% AACT 8 0.46% CNMT 7 0.4% DXS 7 0.4% 8HGO 6 0.35% NCS 6 0.35% BBE 5 0.29% COR 5 0.29% 16OMT 5 0.29% CCR 5 0.29% CPR 5 0.29% ROT3/CYP90C1 5 0.29% GGPPS 5 0.29% PMT 4 0.23% FLS 4 0.23% SQS/FDFT1 4 0.23% DET2 4 0.23% DWF1 4 0.23% TYDC_DDC 3 0.17% CYP719 3 0.17% ADC 3 0.17% CHI 3 0.17% DFR 3 0.17% ANS/LDOX 3 0.17% TAT 3 0.17% SMO1/SMO2 3 0.17% DWF5 3 0.17% FPPS 3 0.17% MVD 3 0.17% ODC 2 0.12% LAMT 2 0.12% TDC 2 0.12% CCoAOMT 2 0.12% SQE 2 0.12% CPI1 2 0.12% MCT/IspD 2 0.12% HMGS 2 0.12% MVK 2 0.12% HMGR 2 0.12% HDR/IspH 2 0.12% HPPR 1 0.06% HYD1 1 0.06% FK 1 0.06% CYP51G1 1 0.06% DWF7 1 0.06% DXR 1 0.06% IDI 1 0.06% HDS/IspG 1 0.06% PMK 1 0.06% CMK/IspE 1 0.06% MDS/IspF 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	159	11	POD (67)	View species results
Terpenoid pathway	150	18	BAHD (58)	View species results
Alkaloid pathway	125	16	NMT (24)	View species results
Rosmarinic acid pathway	80	7	C4H (38)	View species results
Flavonoid pathway	79	8	UFGT (25)	View species results
Steroid pathway	34	12	CAS (8)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	749	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	103	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
ANangscaffold_40140350	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
ANangscaffold_40140780	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
ANangscaffold_40145380	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
ANangscaffold_40148640	Alkaloid	NMT	medium	pass	NMT__00050__sp_Q944H0_PEAM2_ARATH
ANangscaffold_40149050	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
ANangscaffold_50160960	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
ANangscaffold_50177680	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
ANangscaffold_50185820	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
ANangscaffold_60189450	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
ANangscaffold_60192030	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
ANangscaffold_60203310	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
ANangscaffold_60207330	Alkaloid	NMT	low	borderline	NMT__00060__sp_Q9MAT5_ANM10_ARATH
ANangscaffold_60209690	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
ANangscaffold_60212310	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
ANangscaffold_60214140	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
ANangscaffold_60214340	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
ANangscaffold_70215850	Alkaloid	NMT	medium	pass	NMT__00068__sp_Q9XI84_RBCMT_ARATH
ANangscaffold_70216090	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
ANangscaffold_70218660	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
ANangscaffold_70221840	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
ANangscaffold_70225900	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
ANangscaffold_70229940	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
ANangscaffold_70231880	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
ANangscaffold_70245230	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
ANangscaffold_70247240	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
ANangscaffold_80252800	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
ANangscaffold_90257580	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH