PlantSME Plant secondary metabolism enzyme database

Bazzania tridens (bazzania_tridens)

Imported from atlas release summary for Bazzania tridens.

679
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 22.97% Alkaloid pathway 22.24% Phenylpropanoid pathway 22.24% Flavonoid pathway 15.02% Rosmarinic acid pathway 11.63% Steroid pathway 5.89%
Family Distribution
C4H 8.47% C3'H/CYP98A 6.05% CYP76 5.52% BAHD 4.94% 4CL 4.65% IFS 3.53% POD 3.29% NMT 3.0%
Other Families 60.55%
More Families (95)
T3O 58 2.81% STR 58 2.81% DWF4/CYP90B1 50 2.42% F3H 49 2.37% IFR 47 2.27% BR6OX2/CYP85A2 47 2.27% UGT 42 2.03% 7DLGT 41 1.98% F3'H/CYP75B 39 1.89% UFGT 38 1.84% H6H 36 1.74% GS 34 1.65% G8O/G8H 34 1.65% TRI/TRII 30 1.45% CAD 27 1.31% IO 26 1.26% T16H 25 1.21% COMT 25 1.21% FNS 21 1.02% F3'5'H/CYP75A 20 0.97% HCT 20 0.97% SMT1/SMT2/SMT3 20 0.97% LAMT 18 0.87% PYKS 18 0.87% PAL 18 0.87% RAS 18 0.87% COR 15 0.73% LAC 15 0.73% BR6OX1/CYP85A1 15 0.73% CYP71 15 0.73% CODM/T6ODM 14 0.68% CNMT 13 0.63% ANR 13 0.63% CHS 13 0.63% CSE 12 0.58% NCS 11 0.53% CYP80B1 11 0.53% F5H/CYP84A 10 0.48% CAS 10 0.48% CPD/CYP90A1 10 0.48% CYP719 9 0.44% PMT 9 0.44% SLS 9 0.44% TPS 9 0.44% 16OMT 8 0.39% DFR 8 0.39% CCR 8 0.39% CYP90D1 8 0.39% AACT 8 0.39% SGD 7 0.34% GGPPS 7 0.34% ANS/LDOX 6 0.29% CPR 6 0.29% TAT 6 0.29% BBE 5 0.24% 8HGO 5 0.24% FLS 5 0.24% CYP51G1 5 0.24% ROT3/CYP90C1 5 0.24% GES 4 0.19% CHI 4 0.19% CCoAOMT 4 0.19% HPPR 4 0.19% DET2 4 0.19% DXS 4 0.19% MVK 4 0.19% 7DLH 3 0.15% ADC 3 0.15% MPO 3 0.15% DWF7 3 0.15% HYD1 3 0.15% SMO1/SMO2 3 0.15% SQS/FDFT1 3 0.15% MVD 3 0.15% FPPS 3 0.15% PMK 3 0.15% TDC 2 0.1% 6OMT_4OMT_SOMT 2 0.1% DWF1 2 0.1% CPI1 2 0.1% CMK/IspE 2 0.1% CYP80F1 1 0.05% TYDC_DDC 1 0.05% ISY 1 0.05% SQE 1 0.05% DWF5 1 0.05% FK 1 0.05% DXR 1 0.05% IDI 1 0.05% MCT/IspD 1 0.05% HDS/IspG 1 0.05% MDS/IspF 1 0.05% HMGS 1 0.05% HDR/IspH 1 0.05% HMGR 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 156 19 BAHD (57) View species results
Alkaloid pathway 151 18 T3O (24) View species results
Phenylpropanoid pathway 151 12 POD (59) View species results
Flavonoid pathway 102 11 UFGT (36) View species results
Rosmarinic acid pathway 79 7 C4H (43) View species results
Steroid pathway 40 14 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 887 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 140 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
Btri1282030151500 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri1282620157630 Phenylpropanoid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Btri1282780158610 Phenylpropanoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Btri1284070169860 Phenylpropanoid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Btri1285530185950 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Btri1285530185980 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Btri1287330204000 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Btri659670223160 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Btri682490225390 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Btri704540226820 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri788400236760 Phenylpropanoid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Btri832190243820 Phenylpropanoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Btri895470245410 Phenylpropanoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Btri967960263140 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Btri1007390002720 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Btri1011810004250 Rosmarinic Acid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
Btri1011810004260 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Btri1073030006550 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
Btri1168190018290 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Btri1239400044180 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri1239400044190 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri1252290055070 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Btri1257110061140 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Btri1258060063050 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri1261890071290 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri1266530081350 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Btri1273970106470 Rosmarinic Acid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Btri1275200110510 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Btri1275650113210 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri1278530126220 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Btri1279280130640 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Btri1281370146280 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Btri1282030151500 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri1282620157630 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Btri1282780158610 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Btri1284070169860 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Btri1285530185950 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Btri1285530185980 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Btri1287330204000 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Btri659670223160 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Btri682490225390 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Btri704540226820 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Btri788400236760 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Btri832190243820 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Btri895470245410 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Btri967960263140 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH