PlantSME Plant secondary metabolism enzyme database

Bazzania tridens (bazzania_tridens)

Imported from atlas release summary for Bazzania tridens.

679
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 22.97% Alkaloid pathway 22.24% Phenylpropanoid pathway 22.24% Flavonoid pathway 15.02% Rosmarinic acid pathway 11.63% Steroid pathway 5.89%
Family Distribution
C4H 8.47% C3'H/CYP98A 6.05% CYP76 5.52% BAHD 4.94% 4CL 4.65% IFS 3.53% POD 3.29% NMT 3.0%
Other Families 60.55%
More Families (95)
T3O 58 2.81% STR 58 2.81% DWF4/CYP90B1 50 2.42% F3H 49 2.37% IFR 47 2.27% BR6OX2/CYP85A2 47 2.27% UGT 42 2.03% 7DLGT 41 1.98% F3'H/CYP75B 39 1.89% UFGT 38 1.84% H6H 36 1.74% GS 34 1.65% G8O/G8H 34 1.65% TRI/TRII 30 1.45% CAD 27 1.31% IO 26 1.26% T16H 25 1.21% COMT 25 1.21% FNS 21 1.02% F3'5'H/CYP75A 20 0.97% HCT 20 0.97% SMT1/SMT2/SMT3 20 0.97% LAMT 18 0.87% PYKS 18 0.87% PAL 18 0.87% RAS 18 0.87% COR 15 0.73% LAC 15 0.73% BR6OX1/CYP85A1 15 0.73% CYP71 15 0.73% CODM/T6ODM 14 0.68% CNMT 13 0.63% ANR 13 0.63% CHS 13 0.63% CSE 12 0.58% NCS 11 0.53% CYP80B1 11 0.53% F5H/CYP84A 10 0.48% CAS 10 0.48% CPD/CYP90A1 10 0.48% CYP719 9 0.44% PMT 9 0.44% SLS 9 0.44% TPS 9 0.44% 16OMT 8 0.39% DFR 8 0.39% CCR 8 0.39% CYP90D1 8 0.39% AACT 8 0.39% SGD 7 0.34% GGPPS 7 0.34% ANS/LDOX 6 0.29% CPR 6 0.29% TAT 6 0.29% BBE 5 0.24% 8HGO 5 0.24% FLS 5 0.24% CYP51G1 5 0.24% ROT3/CYP90C1 5 0.24% GES 4 0.19% CHI 4 0.19% CCoAOMT 4 0.19% HPPR 4 0.19% DET2 4 0.19% DXS 4 0.19% MVK 4 0.19% 7DLH 3 0.15% ADC 3 0.15% MPO 3 0.15% DWF7 3 0.15% HYD1 3 0.15% SMO1/SMO2 3 0.15% SQS/FDFT1 3 0.15% MVD 3 0.15% FPPS 3 0.15% PMK 3 0.15% TDC 2 0.1% 6OMT_4OMT_SOMT 2 0.1% DWF1 2 0.1% CPI1 2 0.1% CMK/IspE 2 0.1% CYP80F1 1 0.05% TYDC_DDC 1 0.05% ISY 1 0.05% SQE 1 0.05% DWF5 1 0.05% FK 1 0.05% DXR 1 0.05% IDI 1 0.05% MCT/IspD 1 0.05% HDS/IspG 1 0.05% MDS/IspF 1 0.05% HMGS 1 0.05% HDR/IspH 1 0.05% HMGR 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 156 19 BAHD (57) View species results
Alkaloid pathway 151 18 T3O (24) View species results
Phenylpropanoid pathway 151 12 POD (59) View species results
Flavonoid pathway 102 11 UFGT (36) View species results
Rosmarinic acid pathway 79 7 C4H (43) View species results
Steroid pathway 40 14 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 887 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 140 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
Reset
Gene Pathway Family Confidence Status
Btri1000500000110 Rosmarinic Acid RAS low borderline
Btri1093020008320 Rosmarinic Acid RAS low borderline
Btri1202600026800 Rosmarinic Acid RAS low borderline
Btri1241450046290 Rosmarinic Acid RAS low borderline
Btri1261570070460 Rosmarinic Acid RAS medium pass
Btri1275290111080 Rosmarinic Acid RAS low borderline
Btri1279290130810 Rosmarinic Acid RAS low borderline
Btri1279290130830 Rosmarinic Acid RAS low borderline
Btri1279940134580 Rosmarinic Acid RAS low borderline
Btri1281640148860 Rosmarinic Acid RAS medium pass
Btri1282320155310 Rosmarinic Acid RAS medium pass
Btri1282510156680 Rosmarinic Acid RAS low borderline
Btri1282840159590 Rosmarinic Acid RAS medium pass
Btri1284250171960 Rosmarinic Acid RAS medium pass
Btri1286310193760 Rosmarinic Acid RAS medium pass
Btri686720225880 Rosmarinic Acid RAS low borderline
Btri922000251170 Rosmarinic Acid RAS medium pass
Btri925390255370 Rosmarinic Acid RAS low borderline