PlantSME Plant secondary metabolism enzyme database

Bazzania tridens (bazzania_tridens)

Imported from atlas release summary for Bazzania tridens.

679
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 22.97% Alkaloid pathway 22.24% Phenylpropanoid pathway 22.24% Flavonoid pathway 15.02% Rosmarinic acid pathway 11.63% Steroid pathway 5.89%
Family Distribution
C4H 8.47% C3'H/CYP98A 6.05% CYP76 5.52% BAHD 4.94% 4CL 4.65% IFS 3.53% POD 3.29% NMT 3.0%
Other Families 60.55%
More Families (95)
T3O 58 2.81% STR 58 2.81% DWF4/CYP90B1 50 2.42% F3H 49 2.37% IFR 47 2.27% BR6OX2/CYP85A2 47 2.27% UGT 42 2.03% 7DLGT 41 1.98% F3'H/CYP75B 39 1.89% UFGT 38 1.84% H6H 36 1.74% GS 34 1.65% G8O/G8H 34 1.65% TRI/TRII 30 1.45% CAD 27 1.31% IO 26 1.26% T16H 25 1.21% COMT 25 1.21% FNS 21 1.02% F3'5'H/CYP75A 20 0.97% HCT 20 0.97% SMT1/SMT2/SMT3 20 0.97% LAMT 18 0.87% PYKS 18 0.87% PAL 18 0.87% RAS 18 0.87% COR 15 0.73% LAC 15 0.73% BR6OX1/CYP85A1 15 0.73% CYP71 15 0.73% CODM/T6ODM 14 0.68% CNMT 13 0.63% ANR 13 0.63% CHS 13 0.63% CSE 12 0.58% NCS 11 0.53% CYP80B1 11 0.53% F5H/CYP84A 10 0.48% CAS 10 0.48% CPD/CYP90A1 10 0.48% CYP719 9 0.44% PMT 9 0.44% SLS 9 0.44% TPS 9 0.44% 16OMT 8 0.39% DFR 8 0.39% CCR 8 0.39% CYP90D1 8 0.39% AACT 8 0.39% SGD 7 0.34% GGPPS 7 0.34% ANS/LDOX 6 0.29% CPR 6 0.29% TAT 6 0.29% BBE 5 0.24% 8HGO 5 0.24% FLS 5 0.24% CYP51G1 5 0.24% ROT3/CYP90C1 5 0.24% GES 4 0.19% CHI 4 0.19% CCoAOMT 4 0.19% HPPR 4 0.19% DET2 4 0.19% DXS 4 0.19% MVK 4 0.19% 7DLH 3 0.15% ADC 3 0.15% MPO 3 0.15% DWF7 3 0.15% HYD1 3 0.15% SMO1/SMO2 3 0.15% SQS/FDFT1 3 0.15% MVD 3 0.15% FPPS 3 0.15% PMK 3 0.15% TDC 2 0.1% 6OMT_4OMT_SOMT 2 0.1% DWF1 2 0.1% CPI1 2 0.1% CMK/IspE 2 0.1% CYP80F1 1 0.05% TYDC_DDC 1 0.05% ISY 1 0.05% SQE 1 0.05% DWF5 1 0.05% FK 1 0.05% DXR 1 0.05% IDI 1 0.05% MCT/IspD 1 0.05% HDS/IspG 1 0.05% MDS/IspF 1 0.05% HMGS 1 0.05% HDR/IspH 1 0.05% HMGR 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 156 19 BAHD (57) View species results
Alkaloid pathway 151 18 T3O (24) View species results
Phenylpropanoid pathway 151 12 POD (59) View species results
Flavonoid pathway 102 11 UFGT (36) View species results
Rosmarinic acid pathway 79 7 C4H (43) View species results
Steroid pathway 40 14 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 887 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 140 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Btri1008650003420 Alkaloid GS low borderline
Btri1130680011810 Alkaloid GS low borderline
Btri1180320021460 Alkaloid GS low borderline
Btri1197190023430 Alkaloid GS low borderline
Btri1198950025170 Alkaloid GS medium pass
Btri1198980025220 Alkaloid GS low borderline
Btri1204160027720 Alkaloid GS low borderline
Btri1206260029130 Alkaloid GS high pass
Btri1206280029210 Alkaloid GS medium pass
Btri1245910048670 Alkaloid GS low borderline
Btri1261180068500 Alkaloid GS low borderline
Btri1269280089100 Alkaloid GS low borderline
Btri1271770098080 Alkaloid GS medium pass
Btri1275800114580 Alkaloid GS low borderline
Btri1275990115780 Alkaloid GS low borderline
Btri1275990115790 Alkaloid GS low borderline
Btri1279650132560 Alkaloid GS low borderline
Btri1279770134000 Alkaloid GS low borderline
Btri1280400138090 Alkaloid GS high pass
Btri1280400138100 Alkaloid GS high pass
Btri1280540139340 Alkaloid GS medium pass
Btri1280670139870 Alkaloid GS low borderline
Btri1280980142910 Alkaloid GS low borderline
Btri1282430155920 Alkaloid GS low borderline
Btri1282430155930 Alkaloid GS low borderline
Btri1282510156790 Alkaloid GS medium pass
Btri1282560157190 Alkaloid GS low borderline
Btri1285450185830 Alkaloid GS low borderline
Btri1286270192610 Alkaloid GS low borderline
Btri1286270192830 Alkaloid GS low borderline
Btri737600230050 Alkaloid GS low borderline
Btri825840242990 Alkaloid GS medium pass
Btri910450247280 Alkaloid GS low borderline
Btri910450247290 Alkaloid GS low borderline