PlantSME Plant secondary metabolism enzyme database

Bazzania tridens (bazzania_tridens)

Imported from atlas release summary for Bazzania tridens.

1014
Candidate Protein Records
679
Pathway-Level Records
2066
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 22.97% Alkaloid pathway 22.24% Phenylpropanoid pathway 22.24% Flavonoid pathway 15.02% Rosmarinic acid pathway 11.63% Steroid pathway 5.89%
Family Distribution
C4H 8.47% C3'H/CYP98A 6.05% CYP76 5.52% BAHD 4.94% 4CL 4.65% IFS 3.53% POD 3.29% NMT 3.0%
Other Families 60.55%
More Families (95)
T3O 58 2.81% STR 58 2.81% DWF4/CYP90B1 50 2.42% F3H 49 2.37% IFR 47 2.27% BR6OX2/CYP85A2 47 2.27% UGT 42 2.03% 7DLGT 41 1.98% F3'H/CYP75B 39 1.89% UFGT 38 1.84% H6H 36 1.74% GS 34 1.65% G8O/G8H 34 1.65% TRI/TRII 30 1.45% CAD 27 1.31% IO 26 1.26% T16H 25 1.21% COMT 25 1.21% FNS 21 1.02% F3'5'H/CYP75A 20 0.97% HCT 20 0.97% SMT1/SMT2/SMT3 20 0.97% LAMT 18 0.87% PYKS 18 0.87% PAL 18 0.87% RAS 18 0.87% COR 15 0.73% LAC 15 0.73% BR6OX1/CYP85A1 15 0.73% CYP71 15 0.73% CODM/T6ODM 14 0.68% CNMT 13 0.63% ANR 13 0.63% CHS 13 0.63% CSE 12 0.58% NCS 11 0.53% CYP80B1 11 0.53% F5H/CYP84A 10 0.48% CAS 10 0.48% CPD/CYP90A1 10 0.48% CYP719 9 0.44% PMT 9 0.44% SLS 9 0.44% TPS 9 0.44% 16OMT 8 0.39% DFR 8 0.39% CCR 8 0.39% CYP90D1 8 0.39% AACT 8 0.39% SGD 7 0.34% GGPPS 7 0.34% ANS/LDOX 6 0.29% CPR 6 0.29% TAT 6 0.29% BBE 5 0.24% 8HGO 5 0.24% FLS 5 0.24% CYP51G1 5 0.24% ROT3/CYP90C1 5 0.24% GES 4 0.19% CHI 4 0.19% CCoAOMT 4 0.19% HPPR 4 0.19% DET2 4 0.19% DXS 4 0.19% MVK 4 0.19% 7DLH 3 0.15% ADC 3 0.15% MPO 3 0.15% DWF7 3 0.15% HYD1 3 0.15% SMO1/SMO2 3 0.15% SQS/FDFT1 3 0.15% MVD 3 0.15% FPPS 3 0.15% PMK 3 0.15% TDC 2 0.1% 6OMT_4OMT_SOMT 2 0.1% DWF1 2 0.1% CPI1 2 0.1% CMK/IspE 2 0.1% CYP80F1 1 0.05% TYDC_DDC 1 0.05% ISY 1 0.05% SQE 1 0.05% DWF5 1 0.05% FK 1 0.05% DXR 1 0.05% IDI 1 0.05% MCT/IspD 1 0.05% HDS/IspG 1 0.05% MDS/IspF 1 0.05% HMGS 1 0.05% HDR/IspH 1 0.05% HMGR 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 156 19 BAHD (57) View species results
Alkaloid pathway 151 18 T3O (24) View species results
Phenylpropanoid pathway 151 12 POD (59) View species results
Flavonoid pathway 102 11 UFGT (36) View species results
Rosmarinic acid pathway 79 7 C4H (43) View species results
Steroid pathway 40 14 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 887 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 140 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Btri1265430078610 Flavonoid IFS low borderline
Btri1268030085530 Flavonoid IFS medium borderline
Btri1268910088280 Flavonoid IFS low borderline
Btri1269540090310 Flavonoid IFS medium borderline
Btri1269820091430 Flavonoid IFS medium borderline
Btri1270090092580 Flavonoid IFS medium borderline
Btri1270090092600 Flavonoid IFS low borderline
Btri1270830095450 Flavonoid IFS low borderline
Btri1273270103120 Flavonoid IFS medium borderline
Btri1274050106680 Flavonoid IFS low borderline
Btri1274050106690 Flavonoid IFS low borderline
Btri1274100106960 Flavonoid IFS low borderline
Btri1275140110240 Flavonoid IFS medium borderline
Btri1279440131940 Flavonoid IFS low borderline
Btri1280190136040 Flavonoid IFS medium borderline
Btri1280240136480 Flavonoid IFS medium borderline
Btri1281250144910 Flavonoid IFS low borderline
Btri1281610148620 Flavonoid IFS medium borderline
Btri1282150152330 Flavonoid IFS medium borderline
Btri1282300154550 Flavonoid IFS low borderline
Btri1282670158030 Flavonoid IFS low borderline
Btri1284000168390 Flavonoid IFS medium pass
Btri1284000168410 Flavonoid IFS low borderline
Btri1284250171930 Flavonoid IFS low borderline
Btri1285880190100 Flavonoid IFS medium borderline
Btri1285880190110 Flavonoid IFS low borderline
Btri1286470194330 Flavonoid IFS medium borderline
Btri1286610196240 Flavonoid IFS medium borderline
Btri1286750197430 Flavonoid IFS low borderline
Btri1287060200440 Flavonoid IFS low borderline
Btri1287380204790 Flavonoid IFS low borderline
Btri1287670206860 Flavonoid IFS low borderline
Btri1287820208420 Flavonoid IFS medium borderline
Btri1326200220420 Flavonoid IFS low borderline
Btri1326210220440 Flavonoid IFS low borderline
Btri737370230020 Flavonoid IFS medium borderline
Btri737640230060 Flavonoid IFS low borderline
Btri737640230070 Flavonoid IFS low borderline
Btri761530232240 Flavonoid IFS low borderline
Btri780360235460 Flavonoid IFS low borderline
Btri788320236750 Flavonoid IFS low borderline
Btri794420237740 Flavonoid IFS low borderline
Btri906330246320 Flavonoid IFS medium borderline
Btri921480250690 Flavonoid IFS medium borderline
Btri923270252520 Flavonoid IFS low borderline
Btri948740260100 Flavonoid IFS low borderline
Btri961390262010 Flavonoid IFS low borderline
Btri963370262390 Flavonoid IFS low borderline
Btri1258960064220 Flavonoid PAL medium pass
Btri1274950109430 Flavonoid PAL high pass