PlantSME Plant secondary metabolism enzyme database

Beta vulgaris (beta_vulgaris)

Imported from atlas release summary for Beta vulgaris.

1358
Candidate Protein Records
1080
Pathway-Level Records
2861
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 27.96% Phenylpropanoid pathway 22.41% Alkaloid pathway 21.48% Flavonoid pathway 14.35% Rosmarinic acid pathway 8.61% Steroid pathway 5.19%
Family Distribution
C4H 6.64% C3'H/CYP98A 6.36% BAHD 5.8% POD 4.54% CYP76 3.98% 4CL 3.91% UFGT 3.74% UGT 3.7%
Other Families 61.31%
More Families (96)
7DLGT 102 3.57% T3O 100 3.5% IFS 96 3.36% F3H 84 2.94% NMT 71 2.48% F3'H/CYP75B 69 2.41% DWF4/CYP90B1 67 2.34% BR6OX2/CYP85A2 49 1.71% CODM/T6ODM 45 1.57% H6H 44 1.54% STR 44 1.54% CYP71 41 1.43% SMT1/SMT2/SMT3 37 1.29% TRI/TRII 35 1.22% PYKS 33 1.15% COMT 32 1.12% HCT 31 1.08% CYP90D1 28 0.98% RAS 27 0.94% SLS 26 0.91% TPS 26 0.91% CAD 25 0.87% G8O/G8H 24 0.84% 16OMT 24 0.84% LAC 24 0.84% CYP51G1 24 0.84% GES 22 0.77% IFR 22 0.77% PMT 21 0.73% SGD 21 0.73% FNS 20 0.7% CSE 20 0.7% F3'5'H/CYP75A 19 0.66% BR6OX1/CYP85A1 19 0.66% IO 18 0.63% T16H 17 0.59% 7DLH 17 0.59% BBE 16 0.56% CAS 16 0.56% LAMT 14 0.49% GS 14 0.49% NCS 14 0.49% CHS 14 0.49% CCR 12 0.42% TAT 12 0.42% F5H/CYP84A 11 0.38% 8HGO 10 0.35% FPPS 10 0.35% MPO 9 0.31% TYDC_DDC 9 0.31% ANR 9 0.31% ANS/LDOX 9 0.31% DFR 9 0.31% CPD/CYP90A1 9 0.31% COR 8 0.28% SQS/FDFT1 8 0.28% HYD1 8 0.28% CNMT 6 0.21% CYP719 6 0.21% CHI 6 0.21% CCoAOMT 6 0.21% CPR 6 0.21% AACT 6 0.21% CYP80B1 5 0.17% ISY 5 0.17% ROT3/CYP90C1 5 0.17% GGPPS 4 0.14% MVK 4 0.14% XMT_MXMT_DXMT 3 0.1% PAL 3 0.1% HPPR 3 0.1% SQE 3 0.1% DWF7 3 0.1% DXS 3 0.1% MCT/IspD 3 0.1% TDC 2 0.07% ADC 2 0.07% 6OMT_4OMT_SOMT 2 0.07% FLS 2 0.07% DET2 2 0.07% SMO1/SMO2 2 0.07% PMK 2 0.07% MVD 2 0.07% ODC 1 0.03% CYP80F1 1 0.03% CPI1 1 0.03% FK 1 0.03% DWF5 1 0.03% DWF1 1 0.03% IDI 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% CMK/IspE 1 0.03% HMGR 1 0.03% HDR/IspH 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 302 18 BAHD (115) View species results
Phenylpropanoid pathway 242 11 POD (117) View species results
Alkaloid pathway 232 21 7DLGT (47) View species results
Flavonoid pathway 155 10 UFGT (102) View species results
Rosmarinic acid pathway 93 7 C4H (43) View species results
Steroid pathway 56 13 SMT1/SMT2/SMT3 (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1137 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 224 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
BEvul09G0016780.1 Terpenoid UGT low borderline UGT__00078__sp_Q8W491_U73B3_ARATH
BEvul09G0021220.1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
BEvul09G0021260.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
BEvul09G0022210.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
BEvul09G0022280.1 Terpenoid UGT medium pass UGT__00076__sp_Q8L7M0_TUN_ARATH
BEvulScaffold_00190011550.1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA