PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2226
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Bdis01G0038920.1 Alkaloid PMT low borderline
Bdis01G0042290.1 Alkaloid PMT medium pass
Bdis01G0044880.1 Alkaloid PMT medium pass
Bdis01G0044890.1 Alkaloid PMT medium pass
Bdis01G0046910.1 Alkaloid PMT medium borderline
Bdis01G0046910.2 Alkaloid PMT medium borderline
Bdis01G0046910.3 Alkaloid PMT medium borderline
Bdis01G0046910.4 Alkaloid PMT medium borderline
Bdis01G0046910.5 Alkaloid PMT medium borderline
Bdis01G0055530.1 Alkaloid PMT low borderline
Bdis01G0055580.1 Alkaloid PMT medium pass
Bdis01G0058560.1 Alkaloid PMT medium pass
Bdis01G0062550.1 Alkaloid PMT medium borderline
Bdis02G0006100.1 Alkaloid PMT medium pass
Bdis02G0006110.1 Alkaloid PMT medium pass
Bdis02G0006630.1 Alkaloid PMT medium pass
Bdis02G0037660.1 Alkaloid PMT medium pass
Bdis02G0041410.1 Alkaloid PMT medium pass
Bdis02G0049360.1 Alkaloid PMT medium pass
Bdis02G0049370.1 Alkaloid PMT medium pass
Bdis02G0069950.1 Alkaloid PMT low borderline
Bdis02G0069960.1 Alkaloid PMT low borderline
Bdis02G0069970.1 Alkaloid PMT low borderline
Bdis02G0069980.1 Alkaloid PMT low borderline
Bdis03G0011300.1 Alkaloid PMT medium pass
Bdis03G0011860.1 Alkaloid PMT medium borderline
Bdis03G0011860.2 Alkaloid PMT medium borderline
Bdis03G0027360.1 Alkaloid PMT medium pass
Bdis03G0034200.1 Alkaloid PMT medium pass
Bdis03G0042090.1 Alkaloid PMT low borderline
Bdis03G0053960.1 Alkaloid PMT medium pass
Bdis03G0061630.1 Alkaloid PMT low borderline
Bdis04G0007440.1 Alkaloid PMT medium pass
Bdis04G0025590.1 Alkaloid PMT medium pass
Bdis04G0028750.1 Alkaloid PMT medium pass
Bdis04G0036390.1 Alkaloid PMT medium pass
Bdis04G0045400.1 Alkaloid PMT medium pass
Bdis05G0000790.1 Alkaloid PMT medium pass
Bdis05G0000810.1 Alkaloid PMT medium pass
Bdis05G0002000.1 Alkaloid PMT medium pass
Bdis05G0002010.1 Alkaloid PMT low borderline