PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2763
Candidate Protein Records
2226
Pathway-Level Records
5361
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Bdis03G0059890.1 Alkaloid T3O low borderline
Bdis03G0060100.1 Alkaloid T3O low borderline
Bdis03G0061450.1 Alkaloid T3O medium pass
Bdis03G0061450.6 Alkaloid T3O low borderline
Bdis03G0064750.1 Alkaloid T3O medium pass
Bdis04G0004130.1 Alkaloid T3O medium borderline
Bdis04G0006040.1 Alkaloid T3O medium pass
Bdis04G0006040.2 Alkaloid T3O medium pass
Bdis04G0006050.1 Alkaloid T3O medium borderline
Bdis04G0006050.2 Alkaloid T3O medium borderline
Bdis04G0006110.1 Alkaloid T3O medium borderline
Bdis04G0006110.2 Alkaloid T3O medium borderline
Bdis04G0006410.1 Alkaloid T3O medium pass
Bdis04G0011260.1 Alkaloid T3O medium pass
Bdis04G0020720.1 Alkaloid T3O medium borderline
Bdis04G0026800.1 Alkaloid T3O medium pass
Bdis04G0026800.2 Alkaloid T3O medium pass
Bdis04G0026800.3 Alkaloid T3O medium pass
Bdis04G0032370.1 Alkaloid T3O medium borderline
Bdis04G0037400.1 Alkaloid T3O medium borderline
Bdis04G0037420.1 Alkaloid T3O medium borderline
Bdis04G0037750.1 Alkaloid T3O medium borderline
Bdis04G0037760.1 Alkaloid T3O medium borderline
Bdis04G0045970.1 Alkaloid T3O medium borderline
Bdis04G0045970.2 Alkaloid T3O medium borderline
Bdis04G0047010.1 Alkaloid T3O medium borderline
Bdis04G0051260.1 Alkaloid T3O medium pass
Bdis04G0051260.2 Alkaloid T3O medium pass
Bdis04G0052000.1 Alkaloid T3O medium pass
Bdis04G0052330.1 Alkaloid T3O low borderline
Bdis04G0053480.1 Alkaloid T3O medium pass
Bdis04G0053480.2 Alkaloid T3O medium pass
Bdis05G0000380.1 Alkaloid T3O medium pass
Bdis05G0002940.1 Alkaloid T3O medium borderline
Bdis05G0003950.1 Alkaloid T3O medium borderline
Bdis05G0004030.1 Alkaloid T3O medium pass
Bdis05G0004140.1 Alkaloid T3O medium pass
Bdis05G0006540.1 Alkaloid T3O medium borderline
Bdis05G0007750.1 Alkaloid T3O medium borderline
Bdis05G0008000.1 Alkaloid T3O medium borderline
Bdis05G0010920.1 Alkaloid T3O medium borderline
Bdis05G0014260.1 Alkaloid T3O medium borderline
Bdis05G0020620.1 Alkaloid T3O medium pass
Bdis05G0020630.1 Alkaloid T3O medium pass
Bdis05G0023690.1 Alkaloid T3O medium borderline
Bdis05G0023700.1 Alkaloid T3O medium borderline
Bdis05G0023700.2 Alkaloid T3O medium borderline
Bdis05G0023710.1 Alkaloid T3O medium borderline
Bdis05G0023720.1 Alkaloid T3O medium borderline
Bdis05G0023740.1 Alkaloid T3O medium borderline