Brachypodium distachyon (brachypodium_distachyon)
Imported from atlas release summary for Brachypodium distachyon.
2763
Candidate Protein Records
2226
Pathway-Level Records
5361
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5361
Family-Level Calls
4CL
6.6%
BAHD
6.12%
C3'H/CYP98A
5.47%
C4H
5.35%
POD
5.02%
NMT
4.29%
UFGT
3.54%
UGT
3.53%
Other Families
60.08%
More Families (98)
7DLGT
188
3.51%
IFS
166
3.1%
T3O
151
2.82%
CYP76
151
2.82%
STR
141
2.63%
DWF4/CYP90B1
124
2.31%
F3'H/CYP75B
107
2.0%
F3H
104
1.94%
SMT1/SMT2/SMT3
99
1.85%
CYP71
90
1.68%
LAC
82
1.53%
CAS
78
1.45%
SGD
76
1.42%
BR6OX2/CYP85A2
76
1.42%
CAD
71
1.32%
CODM/T6ODM
62
1.16%
PAL
60
1.12%
SLS
55
1.03%
IFR
53
0.99%
TRI/TRII
52
0.97%
CSE
52
0.97%
CYP51G1
50
0.93%
RAS
47
0.88%
FNS
46
0.86%
PYKS
45
0.84%
PMT
41
0.76%
H6H
41
0.76%
CYP90D1
39
0.73%
GS
37
0.69%
TPS
36
0.67%
GES
35
0.65%
CCR
35
0.65%
G8O/G8H
34
0.63%
HCT
31
0.58%
ANR
29
0.54%
IO
28
0.52%
T16H
28
0.52%
COMT
28
0.52%
7DLH
26
0.48%
BR6OX1/CYP85A1
23
0.43%
8HGO
21
0.39%
DFR
21
0.39%
HDS/IspG
21
0.39%
16OMT
20
0.37%
F3'5'H/CYP75A
20
0.37%
CPD/CYP90A1
20
0.37%
MPO
19
0.35%
NCS
16
0.3%
F5H/CYP84A
16
0.3%
TAT
16
0.3%
CYP80B1
15
0.28%
CHS
15
0.28%
BBE
14
0.26%
COR
14
0.26%
TYDC_DDC
13
0.24%
CPR
12
0.22%
FPPS
12
0.22%
LAMT
11
0.21%
CHI
11
0.21%
CCoAOMT
11
0.21%
SMO1/SMO2
11
0.21%
MVD
11
0.21%
DXS
11
0.21%
CNMT
10
0.19%
HPPR
10
0.19%
SQS/FDFT1
10
0.19%
DWF1
9
0.17%
CYP719
8
0.15%
TDC
8
0.15%
AACT
8
0.15%
GGPPS
7
0.13%
ANS/LDOX
6
0.11%
ROT3/CYP90C1
6
0.11%
MVK
6
0.11%
PMK
6
0.11%
IDI
5
0.09%
SQE
4
0.07%
HYD1
4
0.07%
HMGS
4
0.07%
MCT/IspD
4
0.07%
6OMT_4OMT_SOMT
3
0.06%
CYP80F1
3
0.06%
ADC
3
0.06%
ODC
3
0.06%
DWF5
3
0.06%
DXR
3
0.06%
MDS/IspF
3
0.06%
HMGR
3
0.06%
XMT_MXMT_DXMT
2
0.04%
FLS
2
0.04%
DET2
2
0.04%
CMK/IspE
2
0.04%
ISY
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
GPPS
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 601 | 19 | BAHD (251) | View species results |
| Phenylpropanoid pathway | 521 | 11 | POD (255) | View species results |
| Alkaloid pathway | 505 | 20 | NMT (102) | View species results |
| Flavonoid pathway | 276 | 11 | UFGT (183) | View species results |
| Rosmarinic acid pathway | 162 | 7 | C4H (56) | View species results |
| Steroid pathway | 161 | 12 | SMT1/SMT2/SMT3 (67) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1816 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 406 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bdis04G0010590.9 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Bdis04G0030650.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Bdis04G0030650.2 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Bdis04G0030650.3 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Bdis04G0032870.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Bdis04G0032870.2 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Bdis04G0033740.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Bdis04G0033740.2 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Bdis04G0033870.1 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Bdis04G0033870.2 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Bdis04G0034160.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Bdis04G0035600.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Bdis04G0035770.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Bdis04G0045160.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Bdis04G0045160.2 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Bdis04G0045160.3 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Bdis04G0045160.4 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Bdis04G0052720.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Bdis05G0000420.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Bdis05G0002980.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.10 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.11 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.12 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.13 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.14 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.2 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.3 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.4 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.5 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.6 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.7 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.8 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0002980.9 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Bdis05G0006990.1 | Alkaloid | NMT | low | borderline | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Bdis05G0010100.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Bdis05G0018950.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Bdis05G0018950.2 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Bdis05G0025440.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Bdis05G0029810.1 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Bdis04G0044000.1 | Alkaloid | ODC | medium | pass | ODC__00003__sp_P93351_ODC1B_TOBAC |
| Bdis04G0044040.1 | Alkaloid | ODC | medium | pass | ODC__00003__sp_P93351_ODC1B_TOBAC |
| Bdis04G0044070.1 | Alkaloid | ODC | medium | pass | ODC__00003__sp_P93351_ODC1B_TOBAC |
| Bdis01G0038920.1 | Alkaloid | PMT | low | borderline | PMT__00002__sp_Q5JNT2_AT4_ORYSJ |
| Bdis01G0042290.1 | Alkaloid | PMT | medium | pass | PMT__00002__sp_Q5JNT2_AT4_ORYSJ |
| Bdis01G0044880.1 | Alkaloid | PMT | medium | pass | PMT__00002__sp_Q5JNT2_AT4_ORYSJ |
| Bdis01G0044890.1 | Alkaloid | PMT | medium | pass | PMT__00002__sp_Q5JNT2_AT4_ORYSJ |
| Bdis01G0046910.1 | Alkaloid | PMT | medium | borderline | PMT__00001__sp_Q42963_PMT1_TOBAC |
| Bdis01G0046910.2 | Alkaloid | PMT | medium | borderline | PMT__00001__sp_Q42963_PMT1_TOBAC |
| Bdis01G0046910.3 | Alkaloid | PMT | medium | borderline | PMT__00001__sp_Q42963_PMT1_TOBAC |
| Bdis01G0046910.4 | Alkaloid | PMT | medium | borderline | PMT__00001__sp_Q42963_PMT1_TOBAC |