PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2226
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Bdis01G0032560.1 Alkaloid 7DLGT medium pass
Bdis01G0032560.2 Alkaloid 7DLGT medium pass
Bdis01G0032570.1 Alkaloid 7DLGT medium pass
Bdis01G0032590.1 Alkaloid 7DLGT medium pass
Bdis01G0033540.1 Alkaloid 7DLGT low borderline
Bdis01G0040540.1 Alkaloid 7DLGT low borderline
Bdis01G0040550.1 Alkaloid 7DLGT low borderline
Bdis01G0044940.1 Alkaloid 7DLGT low borderline
Bdis01G0044960.1 Alkaloid 7DLGT low borderline
Bdis01G0045030.1 Alkaloid 7DLGT low borderline
Bdis01G0050580.1 Alkaloid 7DLGT low borderline
Bdis01G0050780.1 Alkaloid 7DLGT low borderline
Bdis01G0050990.1 Alkaloid 7DLGT medium pass
Bdis01G0052080.1 Alkaloid 7DLGT low borderline
Bdis01G0052640.1 Alkaloid 7DLGT low borderline
Bdis01G0053360.1 Alkaloid 7DLGT medium pass
Bdis01G0053360.2 Alkaloid 7DLGT medium pass
Bdis01G0053900.1 Alkaloid 7DLGT low borderline
Bdis01G0054060.1 Alkaloid 7DLGT low borderline
Bdis01G0055110.1 Alkaloid 7DLGT low borderline
Bdis01G0063470.1 Alkaloid 7DLGT medium pass
Bdis01G0063480.1 Alkaloid 7DLGT high pass
Bdis01G0063490.1 Alkaloid 7DLGT medium pass
Bdis01G0063500.1 Alkaloid 7DLGT high pass
Bdis01G0063510.1 Alkaloid 7DLGT medium pass
Bdis01G0074440.1 Alkaloid 7DLGT low borderline
Bdis01G0074450.1 Alkaloid 7DLGT low borderline
Bdis01G0075100.1 Alkaloid 7DLGT medium pass
Bdis01G0076320.1 Alkaloid 7DLGT low borderline
Bdis01G0076740.1 Alkaloid 7DLGT medium pass
Bdis01G0084360.1 Alkaloid 7DLGT low borderline
Bdis01G0084500.1 Alkaloid 7DLGT low borderline
Bdis01G0084500.2 Alkaloid 7DLGT low borderline
Bdis02G0005750.1 Alkaloid 7DLGT medium pass
Bdis02G0005770.1 Alkaloid 7DLGT low borderline
Bdis02G0005770.2 Alkaloid 7DLGT low borderline
Bdis02G0005830.1 Alkaloid 7DLGT medium pass
Bdis02G0005840.1 Alkaloid 7DLGT low borderline
Bdis02G0005840.2 Alkaloid 7DLGT low borderline
Bdis02G0006160.1 Alkaloid 7DLGT low borderline
Bdis02G0006170.1 Alkaloid 7DLGT low borderline
Bdis02G0007390.1 Alkaloid 7DLGT medium pass
Bdis02G0009780.1 Alkaloid 7DLGT low borderline
Bdis02G0010010.1 Alkaloid 7DLGT low borderline
Bdis02G0010010.2 Alkaloid 7DLGT low borderline
Bdis02G0012890.1 Alkaloid 7DLGT low borderline
Bdis02G0012890.2 Alkaloid 7DLGT low borderline
Bdis02G0015220.1 Alkaloid 7DLGT low borderline
Bdis02G0020990.1 Alkaloid 7DLGT low borderline
Bdis02G0023060.1 Alkaloid 7DLGT medium pass