PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2763
Candidate Protein Records
2226
Pathway-Level Records
5361
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bdis01G0044650.1 Alkaloid T3O medium borderline
Bdis01G0044650.2 Alkaloid T3O medium borderline
Bdis01G0045840.1 Alkaloid T3O medium pass
Bdis01G0045840.2 Alkaloid T3O medium pass
Bdis01G0061660.1 Alkaloid T3O medium pass
Bdis01G0061660.2 Alkaloid T3O low borderline
Bdis01G0065650.1 Alkaloid T3O medium pass
Bdis01G0067840.1 Alkaloid T3O medium borderline
Bdis01G0071650.1 Alkaloid T3O medium pass
Bdis01G0076150.2 Alkaloid T3O medium pass
Bdis01G0081710.1 Alkaloid T3O medium borderline
Bdis01G0088090.1 Alkaloid T3O low borderline
Bdis01G0090210.1 Alkaloid T3O low borderline
Bdis01G0090230.1 Alkaloid T3O low borderline
Bdis01G0090250.1 Alkaloid T3O low borderline
Bdis01G0092520.1 Alkaloid T3O medium borderline
Bdis01G0092670.1 Alkaloid T3O medium borderline
Bdis02G0006440.1 Alkaloid T3O medium pass
Bdis02G0007240.1 Alkaloid T3O medium pass
Bdis02G0007240.2 Alkaloid T3O medium pass
Bdis02G0007240.3 Alkaloid T3O medium pass
Bdis02G0008130.1 Alkaloid T3O low borderline
Bdis02G0009070.1 Alkaloid T3O medium borderline
Bdis02G0009080.1 Alkaloid T3O medium borderline
Bdis02G0009090.1 Alkaloid T3O medium borderline
Bdis02G0012560.1 Alkaloid T3O medium borderline
Bdis02G0025750.1 Alkaloid T3O medium borderline
Bdis02G0026200.1 Alkaloid T3O medium borderline
Bdis02G0028650.1 Alkaloid T3O medium pass
Bdis02G0029740.1 Alkaloid T3O medium borderline
Bdis02G0030210.1 Alkaloid T3O medium pass
Bdis02G0030220.1 Alkaloid T3O medium pass
Bdis02G0030220.2 Alkaloid T3O medium pass
Bdis02G0030220.3 Alkaloid T3O medium pass
Bdis02G0030220.4 Alkaloid T3O medium pass
Bdis02G0030220.5 Alkaloid T3O medium pass
Bdis02G0032040.1 Alkaloid T3O medium borderline
Bdis02G0032380.1 Alkaloid T3O medium pass
Bdis02G0036730.1 Alkaloid T3O medium pass
Bdis02G0059990.1 Alkaloid T3O low borderline
Bdis02G0060000.1 Alkaloid T3O medium pass
Bdis02G0060010.1 Alkaloid T3O medium pass
Bdis02G0062950.1 Alkaloid T3O low borderline
Bdis02G0063200.1 Alkaloid T3O low borderline
Bdis02G0070000.1 Alkaloid T3O low borderline
Bdis03G0005770.1 Alkaloid T3O medium borderline
Bdis03G0007580.1 Alkaloid T3O medium borderline
Bdis03G0007690.1 Alkaloid T3O medium borderline
Bdis03G0007720.1 Alkaloid T3O medium borderline
Bdis03G0007730.1 Alkaloid T3O medium borderline