PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2763
Candidate Protein Records
2226
Pathway-Level Records
5361
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bdis04G0037760.1 Alkaloid T3O medium borderline
Bdis04G0045970.1 Alkaloid T3O medium borderline
Bdis04G0045970.2 Alkaloid T3O medium borderline
Bdis04G0047010.1 Alkaloid T3O medium borderline
Bdis04G0051260.1 Alkaloid T3O medium pass
Bdis04G0051260.2 Alkaloid T3O medium pass
Bdis04G0052000.1 Alkaloid T3O medium pass
Bdis04G0052330.1 Alkaloid T3O low borderline
Bdis04G0053480.1 Alkaloid T3O medium pass
Bdis04G0053480.2 Alkaloid T3O medium pass
Bdis05G0000380.1 Alkaloid T3O medium pass
Bdis05G0002940.1 Alkaloid T3O medium borderline
Bdis05G0003950.1 Alkaloid T3O medium borderline
Bdis05G0004030.1 Alkaloid T3O medium pass
Bdis05G0004140.1 Alkaloid T3O medium pass
Bdis05G0006540.1 Alkaloid T3O medium borderline
Bdis05G0007750.1 Alkaloid T3O medium borderline
Bdis05G0008000.1 Alkaloid T3O medium borderline
Bdis05G0010920.1 Alkaloid T3O medium borderline
Bdis05G0014260.1 Alkaloid T3O medium borderline
Bdis05G0020620.1 Alkaloid T3O medium pass
Bdis05G0020630.1 Alkaloid T3O medium pass
Bdis05G0023690.1 Alkaloid T3O medium borderline
Bdis05G0023700.1 Alkaloid T3O medium borderline
Bdis05G0023700.2 Alkaloid T3O medium borderline
Bdis05G0023710.1 Alkaloid T3O medium borderline
Bdis05G0023720.1 Alkaloid T3O medium borderline
Bdis05G0023740.1 Alkaloid T3O medium borderline
Bdis05G0023750.1 Alkaloid T3O medium borderline
Bdis02G0042980.1 Alkaloid TDC low borderline
Bdis02G0047230.1 Alkaloid TDC low borderline
Bdis03G0052680.1 Alkaloid TDC low borderline
Bdis03G0055850.1 Alkaloid TDC low borderline
Bdis03G0055850.2 Alkaloid TDC low borderline
Bdis03G0055850.3 Alkaloid TDC low borderline
Bdis03G0055850.4 Alkaloid TDC low borderline
Bdis05G0009740.1 Alkaloid TDC low borderline
Bdis01G0003300.1 Alkaloid TRI/TRII medium pass
Bdis01G0005220.1 Alkaloid TRI/TRII medium pass
Bdis01G0005220.2 Alkaloid TRI/TRII medium pass
Bdis01G0010600.1 Alkaloid TRI/TRII medium pass
Bdis01G0016150.1 Alkaloid TRI/TRII low borderline
Bdis01G0020570.1 Alkaloid TRI/TRII low borderline
Bdis01G0021750.1 Alkaloid TRI/TRII medium pass
Bdis01G0022160.1 Alkaloid TRI/TRII medium pass
Bdis01G0027160.1 Alkaloid TRI/TRII medium pass
Bdis01G0039520.1 Alkaloid TRI/TRII medium pass
Bdis01G0055570.1 Alkaloid TRI/TRII medium pass
Bdis01G0055590.1 Alkaloid TRI/TRII medium pass
Bdis01G0067480.1 Alkaloid TRI/TRII medium pass