PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2226
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
Bdis04G0028570.8 Rosmarinic Acid 4CL low borderline
Bdis04G0028570.9 Rosmarinic Acid 4CL low borderline
Bdis04G0031400.1 Rosmarinic Acid 4CL low borderline
Bdis04G0035030.1 Rosmarinic Acid 4CL low borderline
Bdis04G0035030.2 Rosmarinic Acid 4CL low borderline
Bdis04G0035030.3 Rosmarinic Acid 4CL low borderline
Bdis04G0045090.1 Rosmarinic Acid 4CL medium pass
Bdis04G0050000.1 Rosmarinic Acid 4CL low borderline
Bdis04G0050000.2 Rosmarinic Acid 4CL low borderline
Bdis04G0051820.1 Rosmarinic Acid 4CL low borderline
Bdis04G0053800.1 Rosmarinic Acid 4CL low borderline
Bdis05G0005400.1 Rosmarinic Acid 4CL medium pass
Bdis05G0008510.1 Rosmarinic Acid 4CL low borderline
Bdis05G0008510.2 Rosmarinic Acid 4CL low borderline
Bdis05G0008510.4 Rosmarinic Acid 4CL low borderline
Bdis05G0008510.5 Rosmarinic Acid 4CL low borderline
Bdis05G0029680.1 Rosmarinic Acid 4CL medium pass
Bdis05G0030550.1 Rosmarinic Acid 4CL medium pass
Bdis01G0003030.1 Rosmarinic Acid C4H low borderline
Bdis01G0003150.1 Rosmarinic Acid C4H medium pass
Bdis01G0003230.1 Rosmarinic Acid C4H low borderline
Bdis01G0007470.1 Rosmarinic Acid C4H low borderline
Bdis01G0008290.1 Rosmarinic Acid C4H low borderline
Bdis01G0008300.1 Rosmarinic Acid C4H low borderline
Bdis01G0008310.1 Rosmarinic Acid C4H low borderline
Bdis01G0009740.1 Rosmarinic Acid C4H medium pass
Bdis01G0011150.1 Rosmarinic Acid C4H low borderline
Bdis01G0012100.1 Rosmarinic Acid C4H low borderline
Bdis01G0013690.1 Rosmarinic Acid C4H low borderline
Bdis01G0013690.2 Rosmarinic Acid C4H low borderline
Bdis01G0014310.1 Rosmarinic Acid C4H medium pass
Bdis01G0014310.2 Rosmarinic Acid C4H low borderline
Bdis01G0018040.1 Rosmarinic Acid C4H medium pass
Bdis01G0018420.1 Rosmarinic Acid C4H medium pass
Bdis01G0019050.1 Rosmarinic Acid C4H low borderline
Bdis01G0020300.1 Rosmarinic Acid C4H low borderline
Bdis01G0020360.1 Rosmarinic Acid C4H low borderline
Bdis01G0020870.1 Rosmarinic Acid C4H low borderline
Bdis01G0023260.1 Rosmarinic Acid C4H low borderline
Bdis01G0023380.1 Rosmarinic Acid C4H low borderline
Bdis01G0023380.4 Rosmarinic Acid C4H low borderline
Bdis01G0023380.5 Rosmarinic Acid C4H low borderline
Bdis01G0024140.1 Rosmarinic Acid C4H low borderline
Bdis01G0024160.1 Rosmarinic Acid C4H low borderline
Bdis01G0024160.2 Rosmarinic Acid C4H low borderline
Bdis01G0024160.3 Rosmarinic Acid C4H low borderline
Bdis01G0024160.4 Rosmarinic Acid C4H low borderline
Bdis01G0026600.1 Rosmarinic Acid C4H medium pass
Bdis01G0026630.1 Rosmarinic Acid C4H low borderline
Bdis01G0029680.1 Rosmarinic Acid C4H low borderline