PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2226
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Bdis03G0025160.1 Alkaloid 8HGO medium borderline
Bdis03G0034710.1 Alkaloid 8HGO low borderline
Bdis03G0057880.1 Alkaloid 8HGO medium borderline
Bdis03G0064460.1 Alkaloid 8HGO medium borderline
Bdis04G0026490.1 Alkaloid 8HGO medium borderline
Bdis04G0026490.2 Alkaloid 8HGO medium borderline
Bdis04G0026510.1 Alkaloid 8HGO medium borderline
Bdis04G0026520.1 Alkaloid 8HGO medium borderline
Bdis01G0059460.1 Alkaloid ADC medium pass
Bdis01G0059460.2 Alkaloid ADC medium pass
Bdis03G0013930.1 Alkaloid ADC low borderline
Bdis01G0046600.1 Alkaloid BBE medium borderline
Bdis01G0046610.1 Alkaloid BBE medium borderline
Bdis01G0046620.1 Alkaloid BBE medium borderline
Bdis01G0067630.1 Alkaloid BBE low borderline
Bdis03G0010160.1 Alkaloid BBE low borderline
Bdis03G0011580.1 Alkaloid BBE medium borderline
Bdis03G0019710.1 Alkaloid BBE medium borderline
Bdis03G0039970.1 Alkaloid BBE medium borderline
Bdis03G0040140.1 Alkaloid BBE medium borderline
Bdis04G0022840.1 Alkaloid BBE medium borderline
Bdis05G0003390.1 Alkaloid BBE medium borderline
Bdis05G0003480.1 Alkaloid BBE medium borderline
Bdis05G0003510.1 Alkaloid BBE medium borderline
Bdis05G0018890.1 Alkaloid BBE medium borderline
Bdis01G0003690.1 Alkaloid CNMT low borderline
Bdis01G0003890.1 Alkaloid CNMT low borderline
Bdis01G0045360.1 Alkaloid CNMT medium borderline
Bdis01G0057440.2 Alkaloid CNMT low borderline
Bdis01G0057440.3 Alkaloid CNMT low borderline
Bdis01G0058390.1 Alkaloid CNMT low borderline
Bdis02G0001930.2 Alkaloid CNMT low borderline
Bdis02G0045770.1 Alkaloid CNMT low borderline
Bdis02G0045770.2 Alkaloid CNMT low borderline
Bdis04G0001790.1 Alkaloid CNMT low borderline
Bdis01G0000950.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0017650.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0017650.2 Alkaloid CODM/T6ODM medium borderline
Bdis01G0017650.3 Alkaloid CODM/T6ODM medium borderline
Bdis01G0045400.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0051580.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0054600.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0054600.2 Alkaloid CODM/T6ODM medium borderline
Bdis01G0056450.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0056460.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0056460.2 Alkaloid CODM/T6ODM medium borderline
Bdis01G0056490.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0056500.1 Alkaloid CODM/T6ODM medium borderline
Bdis01G0056500.3 Alkaloid CODM/T6ODM medium borderline
Bdis01G0057450.1 Alkaloid CODM/T6ODM medium borderline