PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2763
Candidate Protein Records
2226
Pathway-Level Records
5361
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bdis04G0006050.2 Rosmarinic Acid C4H medium pass
Bdis04G0006110.1 Rosmarinic Acid C4H low borderline
Bdis04G0006110.2 Rosmarinic Acid C4H low borderline
Bdis04G0006410.1 Rosmarinic Acid C4H low borderline
Bdis04G0009210.1 Rosmarinic Acid C4H medium pass
Bdis04G0011210.1 Rosmarinic Acid C4H low borderline
Bdis04G0011230.1 Rosmarinic Acid C4H low borderline
Bdis04G0011230.2 Rosmarinic Acid C4H low borderline
Bdis04G0011260.1 Rosmarinic Acid C4H low borderline
Bdis04G0011290.1 Rosmarinic Acid C4H low borderline
Bdis04G0018430.1 Rosmarinic Acid C4H low borderline
Bdis04G0020720.1 Rosmarinic Acid C4H low borderline
Bdis04G0026800.1 Rosmarinic Acid C4H low borderline
Bdis04G0026800.2 Rosmarinic Acid C4H low borderline
Bdis04G0026800.3 Rosmarinic Acid C4H low borderline
Bdis04G0030660.1 Rosmarinic Acid C4H low borderline
Bdis04G0030660.2 Rosmarinic Acid C4H low borderline
Bdis04G0032350.1 Rosmarinic Acid C4H low borderline
Bdis04G0032370.1 Rosmarinic Acid C4H medium pass
Bdis04G0035570.1 Rosmarinic Acid C4H low borderline
Bdis04G0037400.1 Rosmarinic Acid C4H medium pass
Bdis04G0037420.1 Rosmarinic Acid C4H medium pass
Bdis04G0037750.1 Rosmarinic Acid C4H low borderline
Bdis04G0037760.1 Rosmarinic Acid C4H medium pass
Bdis04G0042880.1 Rosmarinic Acid C4H low borderline
Bdis04G0042880.2 Rosmarinic Acid C4H low borderline
Bdis04G0042880.3 Rosmarinic Acid C4H low borderline
Bdis04G0042950.1 Rosmarinic Acid C4H low borderline
Bdis04G0043840.1 Rosmarinic Acid C4H low borderline
Bdis04G0045970.1 Rosmarinic Acid C4H low borderline
Bdis04G0045970.2 Rosmarinic Acid C4H low borderline
Bdis04G0047010.1 Rosmarinic Acid C4H medium pass
Bdis04G0047590.1 Rosmarinic Acid C4H low borderline
Bdis04G0047600.1 Rosmarinic Acid C4H low borderline
Bdis04G0050100.1 Rosmarinic Acid C4H low borderline
Bdis04G0050140.1 Rosmarinic Acid C4H low borderline
Bdis04G0052000.1 Rosmarinic Acid C4H low borderline
Bdis04G0053470.1 Rosmarinic Acid C4H low borderline
Bdis04G0053470.2 Rosmarinic Acid C4H low borderline
Bdis04G0053470.3 Rosmarinic Acid C4H low borderline
Bdis04G0053470.4 Rosmarinic Acid C4H low borderline
Bdis04G0053470.5 Rosmarinic Acid C4H low borderline
Bdis04G0053480.1 Rosmarinic Acid C4H low borderline
Bdis04G0053480.2 Rosmarinic Acid C4H low borderline
Bdis05G0000380.1 Rosmarinic Acid C4H low borderline
Bdis05G0001020.1 Rosmarinic Acid C4H medium pass
Bdis05G0001040.1 Rosmarinic Acid C4H low borderline
Bdis05G0001040.2 Rosmarinic Acid C4H low borderline
Bdis05G0001040.3 Rosmarinic Acid C4H low borderline
Bdis05G0001040.4 Rosmarinic Acid C4H low borderline