PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2763
Candidate Protein Records
2226
Pathway-Level Records
5361
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bdis03G0041060.1 Alkaloid G8O/G8H medium borderline
Bdis03G0041080.1 Alkaloid G8O/G8H medium borderline
Bdis03G0043350.1 Alkaloid G8O/G8H medium borderline
Bdis03G0050940.1 Alkaloid G8O/G8H medium borderline
Bdis04G0004210.1 Alkaloid G8O/G8H medium borderline
Bdis04G0004220.1 Alkaloid G8O/G8H medium borderline
Bdis04G0009210.1 Alkaloid G8O/G8H medium borderline
Bdis04G0011210.1 Alkaloid G8O/G8H medium borderline
Bdis04G0011230.1 Alkaloid G8O/G8H low borderline
Bdis04G0011230.2 Alkaloid G8O/G8H low borderline
Bdis04G0032350.1 Alkaloid G8O/G8H medium borderline
Bdis04G0042880.1 Alkaloid G8O/G8H low borderline
Bdis04G0042880.2 Alkaloid G8O/G8H low borderline
Bdis04G0047590.1 Alkaloid G8O/G8H medium borderline
Bdis04G0047600.1 Alkaloid G8O/G8H medium borderline
Bdis04G0050140.1 Alkaloid G8O/G8H medium borderline
Bdis05G0001040.3 Alkaloid G8O/G8H medium borderline
Bdis05G0001040.4 Alkaloid G8O/G8H low borderline
Bdis05G0020480.1 Alkaloid G8O/G8H medium borderline
Bdis05G0023740.2 Alkaloid G8O/G8H medium borderline
Bdis05G0026170.1 Alkaloid G8O/G8H medium borderline
Bdis01G0058400.1 Alkaloid GES low borderline
Bdis01G0071660.1 Alkaloid GES medium pass
Bdis01G0075150.1 Alkaloid GES medium pass
Bdis02G0009880.1 Alkaloid GES medium pass
Bdis02G0037530.1 Alkaloid GES low borderline
Bdis02G0037530.2 Alkaloid GES low borderline
Bdis03G0002350.1 Alkaloid GES medium pass
Bdis03G0017380.1 Alkaloid GES medium pass
Bdis03G0019040.1 Alkaloid GES medium pass
Bdis03G0019060.1 Alkaloid GES medium pass
Bdis03G0019070.1 Alkaloid GES medium pass
Bdis03G0039900.1 Alkaloid GES medium pass
Bdis03G0070200.1 Alkaloid GES medium pass
Bdis04G0006080.1 Alkaloid GES medium pass
Bdis04G0006090.1 Alkaloid GES medium pass
Bdis04G0006090.2 Alkaloid GES medium pass
Bdis04G0006090.3 Alkaloid GES medium pass
Bdis04G0006090.4 Alkaloid GES medium pass
Bdis05G0001030.1 Alkaloid GES medium pass
Bdis05G0001030.2 Alkaloid GES medium pass
Bdis05G0001990.1 Alkaloid GES medium pass
Bdis05G0001990.2 Alkaloid GES medium pass
Bdis05G0001990.3 Alkaloid GES medium pass
Bdis05G0002030.1 Alkaloid GES medium pass
Bdis05G0002030.2 Alkaloid GES low borderline
Bdis05G0002030.3 Alkaloid GES low borderline
Bdis05G0002030.4 Alkaloid GES medium pass
Bdis05G0002030.5 Alkaloid GES medium pass
Bdis05G0002050.1 Alkaloid GES medium pass