PlantSME Plant secondary metabolism enzyme database

Brachythecium laetum (brachythecium_laetum)

Imported from atlas release summary for Brachythecium laetum.

668
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 27.1% Terpenoid pathway 25.6% Alkaloid pathway 18.71% Flavonoid pathway 13.17% Rosmarinic acid pathway 8.83% Steroid pathway 6.59%
Family Distribution
C4H 6.88% POD 5.73% C3'H/CYP98A 5.44% BAHD 5.21% CYP76 4.36% 4CL 4.13% NMT 3.84% F3H 2.46%
Other Families 61.95%
More Families (95)
IFS 42 2.41% F3'H/CYP75B 42 2.41% BR6OX2/CYP85A2 39 2.23% STR 37 2.12% DWF4/CYP90B1 37 2.12% UGT 37 2.12% 7DLGT 36 2.06% GS 36 2.06% PAL 36 2.06% T3O 35 2.01% UFGT 34 1.95% IFR 33 1.89% PYKS 29 1.66% COMT 27 1.55% IO 26 1.49% H6H 23 1.32% G8O/G8H 21 1.2% CHS 21 1.2% CODM/T6ODM 20 1.15% CAD 20 1.15% SMT1/SMT2/SMT3 20 1.15% CYP71 20 1.15% TRI/TRII 19 1.09% CAS 19 1.09% F3'5'H/CYP75A 18 1.03% CSE 18 1.03% SLS 15 0.86% 16OMT 15 0.86% LAMT 14 0.8% NCS 14 0.8% LAC 11 0.63% HCT 11 0.63% SGD 9 0.52% CYP80B1 9 0.52% BBE 9 0.52% T16H 9 0.52% RAS 9 0.52% CPD/CYP90A1 9 0.52% CYP90D1 9 0.52% 8HGO 8 0.46% BR6OX1/CYP85A1 8 0.46% COR 7 0.4% PMT 7 0.4% ANR 7 0.4% FNS 7 0.4% F5H/CYP84A 7 0.4% CCR 7 0.4% CPR 7 0.4% MPO 6 0.34% 7DLH 6 0.34% SQS/FDFT1 6 0.34% TPS 6 0.34% GGPPS 6 0.34% CNMT 5 0.29% DFR 5 0.29% AACT 5 0.29% TYDC_DDC 4 0.23% TDC 4 0.23% CHI 4 0.23% TAT 4 0.23% ROT3/CYP90C1 4 0.23% DWF5 4 0.23% DET2 4 0.23% MVK 4 0.23% 6OMT_4OMT_SOMT 3 0.17% GES 3 0.17% SQE 3 0.17% MVD 3 0.17% HDS/IspG 3 0.17% ISY 2 0.11% ADC 2 0.11% ANS/LDOX 2 0.11% FLS 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% IDI 2 0.11% MCT/IspD 2 0.11% FPPS 2 0.11% HDR/IspH 2 0.11% CYP719 1 0.06% XMT_MXMT_DXMT 1 0.06% HPPR 1 0.06% FK 1 0.06% DWF7 1 0.06% CYP51G1 1 0.06% DWF1 1 0.06% CPI1 1 0.06% HYD1 1 0.06% HMGS 1 0.06% CMK/IspE 1 0.06% HMGR 1 0.06% DXS 1 0.06% MDS/IspF 1 0.06% DXR 1 0.06% PMK 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 181 10 POD (91) View species results
Terpenoid pathway 171 19 BAHD (63) View species results
Alkaloid pathway 125 17 NMT (27) View species results
Flavonoid pathway 88 9 UFGT (32) View species results
Rosmarinic acid pathway 59 7 C4H (24) View species results
Steroid pathway 44 13 CAS (19) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 649 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 111 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
Blae1886080014000 Phenylpropanoid CSE low borderline
Blae2116860048260 Phenylpropanoid CSE medium pass
Blae2137310094110 Phenylpropanoid CSE medium pass
Blae2139460104370 Phenylpropanoid CSE medium pass
Blae2139930106970 Phenylpropanoid CSE low borderline
Blae2140610109860 Phenylpropanoid CSE medium pass
Blae2140610109880 Phenylpropanoid CSE medium pass
Blae2144460132310 Phenylpropanoid CSE medium pass
Blae2147710150580 Phenylpropanoid CSE medium pass
Blae2152070178380 Phenylpropanoid CSE medium pass
Blae2154150193800 Phenylpropanoid CSE medium pass
Blae2154220194980 Phenylpropanoid CSE medium pass
Blae2155250202320 Phenylpropanoid CSE medium pass
Blae2155250202350 Phenylpropanoid CSE medium pass
Blae2157050213330 Phenylpropanoid CSE medium pass
Blae2160250239130 Phenylpropanoid CSE low borderline
Blae2160300239370 Phenylpropanoid CSE medium pass
Blae2161330247540 Phenylpropanoid CSE medium pass